Hong, MatMerge_Seq() is not doing preallocation nor setting the flag that allows improper preallocation
-*- mode: compilation; default-directory: "/Users/barrysmith/Src/petsc-dev/src/mat/examples/tests/" -*- Compilation started at Fri Mar 2 16:52:06 make PETSC_DIR=/Users/barrysmith/Src/petsc-dev PETSC_ARCH=arch-gnu runex95 [0]PETSC ERROR: --------------------- Error Message ------------------------------------ [0]PETSC ERROR: Argument out of range! [0]PETSC ERROR: New nonzero at (0,0) caused a malloc! [0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: Petsc Development HG revision: d35fa29f81218e6e5376faf87f3925c16b47cb76 HG Date: Thu Mar 01 19:13:43 2012 -0600 [0]PETSC ERROR: See docs/changes/index.html for recent updates. [0]PETSC ERROR: See docs/faq.html for hints about trouble shooting. [0]PETSC ERROR: See docs/index.html for manual pages. [0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: ./ex95 on a arch-gnu named anlextwls003-010.wl.anl-external.org by barrysmith Fri Mar 2 16:52:06 2012 [0]PETSC ERROR: Libraries linked from /Users/barrysmith/Src/petsc-dev/arch-gnu/lib [0]PETSC ERROR: Configure run at Thu Mar 1 20:56:05 2012 [0]PETSC ERROR: Configure options --download-blacs --download-fftw --download-hypre --download-metis --download-mpich --download-mumps --download-parmetis --download-ptscotch --download-scalapack --download-superlu --download-superlu_dist --download-yaml --with-shared-libraries PETSC_ARCH=arch-gnu [0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: MatSetValues_MPIAIJ() line 506 in /Users/barrysmith/Src/petsc-dev/src/mat/impls/aij/mpi/mpiaij.c [0]PETSC ERROR: [1]PETSC ERROR: --------------------- Error Message ------------------------------------ [1]PETSC ERROR: Argument out of range! [1]PETSC ERROR: New nonzero at (0,0) caused a malloc! [1]PETSC ERROR: ------------------------------------------------------------------------ [1]PETSC ERROR: Petsc Development HG revision: d35fa29f81218e6e5376faf87f3925c16b47cb76 HG Date: Thu Mar 01 19:13:43 2012 -0600 [1]PETSC ERROR: See docs/changes/index.html for recent updates. [1]PETSC ERROR: See docs/faq.html for hints about trouble shooting. [1]PETSC ERROR: See docs/index.html for manual pages. [1]PETSC ERROR: ------------------------------------------------------------------------ [1]PETSC ERROR: ./ex95 on a arch-gnu named anlextwls003-010.wl.anl-external.org by barrysmith Fri Mar 2 16:52:06 2012 [1]PETSC ERROR: Libraries linked from /Users/barrysmith/Src/petsc-dev/arch-gnu/lib [1]PETSC ERROR: Configure run at Thu Mar 1 20:56:05 2012 [1]PETSC ERROR: Configure options --download-blacs --download-fftw --download-hypre --download-metis --download-mpich --download-mumps --download-parmetis --download-ptscotch --download-scalapack --download-superlu --download-superlu_dist --download-yaml --with-shared-libraries PETSC_ARCH=arch-gnu [1]PETSC ERROR: ------------------------------------------------------------------------ [1]PETSC ERROR: MatSetValues_MPIAIJ() line 506 in /Users/barrysmith/Src/petsc-dev/src/mat/impls/aij/mpi/mpiaij.c [1]PETSC ERROR: MatSetValues() line 1141 in /Users/barrysmith/Src/petsc-dev/src/mat/interface/matrix.c [1]PETSC ERROR: MatMerge_SeqsToMPINumeric() line 4548 in /Users/barrysmith/Src/petsc-dev/src/mat/impls/aij/mpi/mpiaij.c [1]PETSC ERROR: MatMerge_SeqsToMPI() line 4848 in /Users/barrysmith/Src/petsc-dev/src/mat/impls/aij/mpi/mpiaij.c [1]PETSC ERROR: main() line 41 in src/mat/examples/tests/ex95.c application called MPI_Abort(MPI_COMM_WORLD, 63) - process 1 [cli_1]: aborting job: application called MPI_Abort(MPI_COMM_WORLD, 63) - process 1 [2]PETSC ERROR: --------------------- Error Message ------------------------------------ [2]PETSC ERROR: Argument out of range! [2]PETSC ERROR: New nonzero at (0,0) caused a malloc! [2]PETSC ERROR: ------------------------------------------------------------------------ [2]PETSC ERROR: Petsc Development HG revision: d35fa29f81218e6e5376faf87f3925c16b47cb76 HG Date: Thu Mar 01 19:13:43 2012 -0600 [2]PETSC ERROR: See docs/changes/index.html for recent updates. [2]PETSC ERROR: See docs/faq.html for hints about trouble shooting. [2]PETSC ERROR: See docs/index.html for manual pages. [2]PETSC ERROR: ------------------------------------------------------------------------ [2]PETSC ERROR: ./ex95 on a arch-gnu named anlextwls003-010.wl.anl-external.org by barrysmith Fri Mar 2 16:52:06 2012 [2]PETSC ERROR: Libraries linked from /Users/barrysmith/Src/petsc-dev/arch-gnu/lib [2]PETSC ERROR: Configure run at Thu Mar 1 20:56:05 2012 [2]PETSC ERROR: Configure options --download-blacs --download-fftw --download-hypre --download-metis --download-mpich --download-mumps --download-parmetis --download-ptscotch --download-scalapack --download-superlu --download-superlu_dist --download-yaml --with-shared-libraries PETSC_ARCH=arch-gnu [2]PETSC ERROR: ------------------------------------------------------------------------ [2]PETSC ERROR: MatSetValues_MPIAIJ() line 506 in /Users/barrysmith/Src/petsc-dev/src/mat/impls/aij/mpi/mpiaij.c [2]PETSC ERROR: MatSetValues() line 1141 in /Users/barrysmith/Src/petsc-dev/src/mat/interface/matrix.c [2]PETSC ERROR: MatMerge_SeqsToMPINumeric() line 4548 in /Users/barrysmith/Src/petsc-dev/src/mat/impls/aij/mpi/mpiaij.c [2]PETSC ERROR: MatMerge_Seq Compilation finished at Fri Mar 2 16:52:06
