> PetscOptionsSetValue(NULL,"-vecscatter_alltoall","true"); > VecScatterCreate... > PetscOptionsClearValue(NULL,"-vecscatter_alltoall") > > You need to possibly change it slightly for different PETSc versions or > Fortran. > > Please let us know how it goes,
This worked, Thanks, > > Barry > > > >> >> The complete list of tuning options is here: >> >> >> http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Vec/VecScatterCreate.html >> >> I wish I had more data, but this is urgent, jobs are in the queue, but >> this is all I have. Any recommendation for parameters that we might >> test while we get more data? >> >> Also, we got this error with -log_view. >> >> This looks like a bug in the code, but its hard to know exactly what. >> However, it should give >> the same error even for a very small problem. Can you run something small >> and get it? >> >> Thanks, >> >> Matt >> >> I've updated their PETSc with maint and we are waiting for it to run >> again. Apparently this was not on the first time step, so the code >> seems to have run for a while with what looks to me like a logic bug. >> >> Thanks, >> Mark >> >> >> [4098]PETSC ERROR: --------------------- Error Message >> -------------------------------------------------------------- >> [4098]PETSC ERROR: Object is in wrong state >> [4098]PETSC ERROR: Logging event had unbalanced begin/end pairs >> [4098]PETSC ERROR: See >> http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble >> shooting. >> [4098]PETSC ERROR: Petsc Release Version 3.6.3, unknown >> [4098]PETSC ERROR: /global/cscratch1/sd/worleyph/XGC1_KNL/xgc2 on a >> v3.6.3-arch-knl-opt64-intel named nid05668 by worleyph Mon Mar 6 >> 11:33:19 2017 >> [4098]PETSC ERROR: Configure options COPTFLAGS="-g -O3 -fp-model fast >> -xMIC-AVX512 -DX2_HAVE_INTEL" CXXOPTFLAGS="-g -O3 -fp-model fast >> -xMIC-AVX512\ >> -DX2_HAVE_INTEL" FOPTFLAGS="-g -O3 -fp-model fast -xMIC-AVX512 >> -DX2_HAVE_INTEL" --download-metis=1 --download-parmetis=1 >> --with-blas-lapack-dir=/g\ >> lobal/common/cori/software/intel/compilers_and_libraries_2017.0.098/linux/mkl >> --with-cc=cc --with-cxx=cc --with-debugging=0 --with-fc=ftn --with-mp\ >> iexec=srun --with-batch=0 --with-memalign=64 --with-64-bit-indices >> --known-mpi-shared-libraries=1 PETSC_ARCH=v3.6.3-arch-knl-opt64-intel >> --with-ope\ >> nmp=1 PETSC_DIR=/global/homes/t/tkoskela/git/petsc >> [4098]PETSC ERROR: #1 PetscLogEventEndDefault() line 696 in >> /global/u2/t/tkoskela/git/petsc/src/sys/logging/utils/eventlog.c >> [4098]PETSC ERROR: #2 VecSet() line 577 in >> /global/u2/t/tkoskela/git/petsc/src/vec/vec/interface/rvector.c >> [4098]PETSC ERROR: #3 VecCreate_Seq() line 44 in >> /global/u2/t/tkoskela/git/petsc/src/vec/vec/impls/seq/bvec3.c >> [4098]PETSC ERROR: #4 VecSetType() line 53 in >> /global/u2/t/tkoskela/git/petsc/src/vec/vec/interface/vecreg.c >> [4098]PETSC ERROR: #5 VecDuplicate_Seq() line 786 in >> /global/u2/t/tkoskela/git/petsc/src/vec/vec/impls/seq/bvec2.c >> [4098]PETSC ERROR: #6 VecDuplicate() line 399 in >> /global/u2/t/tkoskela/git/petsc/src/vec/vec/interface/vector.c >> [4098]PETSC ERROR: #7 VecDuplicateVecs_Default() line 840 in >> /global/u2/t/tkoskela/git/petsc/src/vec/vec/interface/vector.c >> [4098]PETSC ERROR: #8 VecDuplicateVecs() line 473 in >> /global/u2/t/tkoskela/git/petsc/src/vec/vec/interface/vector.c >> >> >> >> -- >> What most experimenters take for granted before they begin their experiments >> is infinitely more interesting than any results to which their experiments >> lead. >> -- Norbert Wiener >
