You can add -v to the offending command line to see what happened, i.e., how nvcc_wrapper passed options to g++.
--Junchao Zhang On Sun, Nov 21, 2021 at 12:05 PM Mark Adams <mfad...@lbl.gov> wrote: > Any idea what is going wrong with this? > > Using PETSC_DIR=/global/homes/m/madams/petsc and > PETSC_ARCH=arch-perlmutter-opt-gcc-kokkos-cuda > C/C++ example src/snes/tutorials/ex19 run successfully with 1 MPI process > C/C++ example src/snes/tutorials/ex19 run successfully with 2 MPI processes > C/C++ example src/snes/tutorials/ex19 run successfully with cuda > gmake[3]: [/global/homes/m/madams/petsc/lib/petsc/conf/rules:301: > ex3k.PETSc] Error 2 (ignored) > *******************Error detected during compile or > link!******************* > See http://www.mcs.anl.gov/petsc/documentation/faq.html > /global/homes/m/madams/petsc/src/snes/tutorials ex3k > > ********************************************************************************* > > PATH=/global/homes/m/madams/petsc/arch-perlmutter-opt-gcc-kokkos-cuda/lib:/global/common/software/nersc/shasta2105/arm-forge/21.0.2-linux-x86_64/bin:/global/common/software/nersc/cos1.3/cuda/11.3.0/bin:/opt/cray/pe/perftools/21.10.0/bin:/opt/cray/pe/papi/ > 6.0.0.10/bin:/opt/cray/pe/gcc/9.3.0/bin:/opt/cray/pe/craype/2.7.11/bin:/global/common/software/nersc/shasta2105/python/3.8-anaconda-2021.05/bin:/global/homes/m/madams/.local/perlmutter/3.8-anaconda-2021.05/bin:/global/common/software/nersc/shasta2105/cmake/git-master/bin:/global/common/software/nersc/bin:/opt/cray/libfabric/1.11.0.4.79/bin:/usr/local/bin:/usr/bin:/bin:/usr/lib/mit/bin:/opt/cray/pe/bin:`dirname > <http://6.0.0.10/bin:/opt/cray/pe/gcc/9.3.0/bin:/opt/cray/pe/craype/2.7.11/bin:/global/common/software/nersc/shasta2105/python/3.8-anaconda-2021.05/bin:/global/homes/m/madams/.local/perlmutter/3.8-anaconda-2021.05/bin:/global/common/software/nersc/shasta2105/cmake/git-master/bin:/global/common/software/nersc/bin:/opt/cray/libfabric/1.11.0.4.79/bin:/usr/local/bin:/usr/bin:/bin:/usr/lib/mit/bin:/opt/cray/pe/bin:dirname> > /global/common/software/nersc/cos1.3/cuda/11.3.0/bin/nvcc` > NVCC_WRAPPER_DEFAULT_COMPILER=CC > /global/homes/m/madams/petsc/arch-perlmutter-opt-gcc-kokkos-cuda/bin/nvcc_wrapper > --expt-extended-lambda -g -Xcompiler -rdynamic -DLANDAU_DIM=2 > -DLANDAU_MAX_SPECIES=10 -DLANDAU_MAX_Q=4 -Xcompiler -fPIC -ccbin CC > -std=c++17 -gencode arch=compute_80,code=sm_80 -Wno-deprecated-gpu-targets > -I/opt/cray/pe/mpich/8.1.10/ofi/gnu/9.1/include -I/opt/cray/pe/libsci/ > 21.08.1.2/GNU/9.1/x86_64/include -I/opt/cray/pe/pmi/6.0.14/include > -I/opt/cray/pe/dsmml/0.2.2/dsmml//include > -I/opt/cray/xpmem/2.2.40-7.0.1.0_3.1__g1d7a24d.shasta/include > -I/global/homes/m/madams/petsc/include > -I/global/homes/m/madams/petsc/arch-perlmutter-opt-gcc-kokkos-cuda/include > -I/global/common/software/nersc/cos1.3/cuda/11.3.0/include -g > -DLANDAU_DIM=2 -DLANDAU_MAX_SPECIES=10 -DLANDAU_MAX_Q=4 -fPIC -O3 -g > -DLANDAU_DIM=2 -DLANDAU_MAX_SPECIES=10 -DLANDAU_MAX_Q=4 -O3 > -L/opt/cray/pe/mpich/8.1.10/ofi/gnu/9.1/lib > -L/opt/cray/pe/mpich/8.1.10/gtl/lib -L/opt/cray/pe/libsci/ > 21.08.1.2/GNU/9.1/x86_64/lib -L/opt/cray/pe/pmi/6.0.14/lib > -L/opt/cray/pe/dsmml/0.2.2/dsmml//lib > -L/opt/cray/xpmem/2.2.40-7.0.1.0_3.1__g1d7a24d.shasta/lib64 > -Wl,--as-needed,-lmpi_gnu_91,--no-as-needed > -Wl,--as-needed,-lsci_gnu_82_mpi,--no-as-needed > -Wl,--as-needed,-lsci_gnu_82,--no-as-needed > -Wl,--as-needed,-ldsmml,--no-as-needed -lpmi -lpmi2 -lmpi_gtl_cuda -ldl > -lxpmem ex3k.kokkos.cxx > > -Wl,-rpath,/global/homes/m/madams/petsc/arch-perlmutter-opt-gcc-kokkos-cuda/lib > -L/global/homes/m/madams/petsc/arch-perlmutter-opt-gcc-kokkos-cuda/lib > -Wl,-rpath,/global/homes/m/madams/petsc/arch-perlmutter-opt-gcc-kokkos-cuda/lib > -L/global/homes/m/madams/petsc/arch-perlmutter-opt-gcc-kokkos-cuda/lib > -Wl,-rpath,/global/common/software/nersc/cos1.3/cuda/11.3.0/lib64 > -L/global/common/software/nersc/cos1.3/cuda/11.3.0/lib64 > -L/global/common/software/nersc/cos1.3/cuda/11.3.0/lib64/stubs > -Wl,-rpath,/opt/cray/pe/mpich/8.1.10/ofi/gnu/9.1/lib > -L/opt/cray/pe/mpich/8.1.10/ofi/gnu/9.1/lib > -Wl,-rpath,/opt/cray/pe/mpich/8.1.10/gtl/lib > -L/opt/cray/pe/mpich/8.1.10/gtl/lib -Wl,-rpath,/opt/cray/pe/libsci/ > 21.08.1.2/GNU/9.1/x86_64/lib -L/opt/cray/pe/libsci/ > 21.08.1.2/GNU/9.1/x86_64/lib -Wl,-rpath,/opt/cray/pe/pmi/6.0.14/lib > -L/opt/cray/pe/pmi/6.0.14/lib -Wl,-rpath,/opt/cray/pe/dsmml/0.2.2/dsmml/lib > -L/opt/cray/pe/dsmml/0.2.2/dsmml/lib > -Wl,-rpath,/opt/cray/xpmem/2.2.40-7.0.1.0_3.1__g1d7a24d.shasta/lib64 > -L/opt/cray/xpmem/2.2.40-7.0.1.0_3.1__g1d7a24d.shasta/lib64 > -Wl,-rpath,/opt/cray/pe/gcc/9.3.0/snos/lib/gcc/x86_64-suse-linux/9.3.0 > -L/opt/cray/pe/gcc/9.3.0/snos/lib/gcc/x86_64-suse-linux/9.3.0 > -Wl,-rpath,/opt/cray/pe/gcc/9.3.0/snos/lib64 > -L/opt/cray/pe/gcc/9.3.0/snos/lib64 > -Wl,-rpath,/opt/cray/pe/gcc/9.3.0/snos/lib > -L/opt/cray/pe/gcc/9.3.0/snos/lib -lpetsc -lkokkoskernels > -lkokkoscontainers -lkokkoscore -lp4est -lsc -lparmetis -lmetis -lz > -lcudart -lcufft -lcublas -lcusparse -lcusolver -lcurand -lcuda -lX11 > -lstdc++ -ldl -lpmi -lpmi2 -lmpi_gtl_cuda -lxpmem -lgfortran -lm > -lmpifort_gnu_91 -lmpi_gnu_91 -lsci_gnu_82_mpi -lsci_gnu_82 -ldsmml > -lgfortran -lquadmath -lpthread -lm -lgcc_s -lquadmath -lstdc++ -ldl -o ex3k > nvcc_wrapper - *warning* you have set multiple optimization flags (-O*), > only the last is used because nvcc can only accept a single optimization > setting. > > *g++: error: unrecognized command line option '-rpath'*gmake[4]: *** > [/global/homes/m/madams/petsc/lib/petsc/conf/test:32: ex3k] Error 1 > gmake[3]: [makefile:115: runex3k_kokkos] Error 2 (ignored) > 1,25c1,4 > < atol=1e-50, rtol=1e-08, stol=1e-08, maxit=50, maxf=10000 > < Vec Object: Exact Solution 2 MPI processes > < type: mpikokkos >