Well I found, accidentally, that turning CUDA aware MPI on with export CRAY_ACCEL_TARGET=nvidia80 seems to have fixed this. Not sure what is going on.
On Thu, Dec 9, 2021 at 11:21 AM Mark Adams <[email protected]> wrote: > I am getting this error. I have built this w/o hypre and the test are > fine, including the CUDA tests. > Any ideas? > > I notice that the tests use -dm_mat_type aijcusparse with hypre. > > Thanks, > Mark > > 08:13 nid003929 adams/fix_mat_ex5k= perlmutter:~/petsc$ make > PETSC_DIR=/global/homes/m/madams/petsc > PETSC_ARCH=arch-perlmutter-opt-nvidia-cuda check > Running check examples to verify correct installation > Using PETSC_DIR=/global/homes/m/madams/petsc and > PETSC_ARCH=arch-perlmutter-opt-nvidia-cuda > C/C++ example src/snes/tutorials/ex19 run successfully with 1 MPI process > C/C++ example src/snes/tutorials/ex19 run successfully with 2 MPI processes > 1,5c1,70 > < lid velocity = 0.0016, prandtl # = 1., grashof # = 1. > < 0 SNES Function norm 0.0406612 > < 1 SNES Function norm 4.12227e-06 > < 2 SNES Function norm 6.098e-11 > < Number of SNES iterations = 2 > --- > > [0]PETSC ERROR: --------------------- Error Message > -------------------------------------------------------------- > > [0]PETSC ERROR: GPU error > > [0]PETSC ERROR: cuda error 46 (cudaErrorDevicesUnavailable) : all > CUDA-capable devices are busy or unavailable > > [0]PETSC ERROR: See https://petsc.org/release/faq/ for trouble shooting. > > [0]PETSC ERROR: Petsc Development GIT revision: v3.16.1-442-gebb4a459f5 > GIT Date: 2021-12-08 08:59:23 -0500 > > [0]PETSC ERROR: /global/u2/m/madams/petsc/src/snes/tutorials/./ex19 on a > named nid003929 by madams Thu Dec 9 08:13:49 2021 > > [0]PETSC ERROR: Configure options --CFLAGS=" -g -DLANDAU_DIM=2 > -DLANDAU_MAX_SPECIES=10 -DLANDAU_MAX_Q=4 -mp=gpu" --CXXFLAGS=" -g > -DLANDAU_DIM=2 -DLANDAU_MAX_SPECIES=10 -DLANDAU_MAX_Q=4 -mp=gpu" --FFLAGS=" > -g -mp=gpu" --with-cc=cc --with-cxx=CC --with-fc=ftn > --with-cudac=/opt/nvidia/hpc_sdk/Linux_x86_64/21.9/compilers/bin/nvcc > --with-debugging=0 --download-hypre=1 --with-cuda=1 --with-cuda-arch=80 > --with-mpiexec=srun --with-batch=0 --download-p4est=1 --with-zlib=1 > --with-make-np=8 > --prefix=/global/cfs/projectdirs/m3904/petsc/current/perlmutter-opt-nvidia21.9 > PETSC_ARCH=arch-perlmutter-opt-nvidia-cuda > > [0]PETSC ERROR: #1 initialize() at > /global/u2/m/madams/petsc/src/sys/objects/device/impls/cupm/cupmdevice.cxx:70 > > [0]PETSC ERROR: #2 getDevice() at > /global/u2/m/madams/petsc/src/sys/objects/device/impls/cupm/cupmdevice.cxx:360 > > [0]PETSC ERROR: #3 PetscDeviceCreate() at > /global/u2/m/madams/petsc/src/sys/objects/device/interface/device.cxx:102 > > [0]PETSC ERROR: #4 PetscDeviceInitializeDefaultDevice_Internal() at > /global/u2/m/madams/petsc/src/sys/objects/device/interface/device.cxx:266 > > [1]PETSC ERROR: --------------------- Error Message > -------------------------------------------------------------- > > [1]PETSC ERROR: GPU error > > [1]PETSC ERROR: cuda error 46 (cudaErrorDevicesUnavailable) : all > CUDA-capable devices are busy or unavailable > > [1]PETSC ERROR: See https://petsc.org/release/faq/ for trouble shooting. > > [1]PETSC ERROR: Petsc Development GIT revision: v3.16.1-442-gebb4a459f5 > GIT Date: 2021-12-08 08:59:23 -0500 > > [1]PETSC ERROR: /global/u2/m/madams/petsc/src/snes/tutorials/./ex19 on a > named nid003929 by madams Thu Dec 9 08:13:49 2021 > > [1]PETSC ERROR: Configure options --CFLAGS=" -g -DLANDAU_DIM=2 > -DLANDAU_MAX_SPECIES=10 -DLANDAU_MAX_Q=4 -mp=gpu" --CXXFLAGS=" -g > -DLANDAU_DIM=2 -DLANDAU_MAX_SPECIES=10 -DLANDAU_MAX_Q=4 -mp=gpu" --FFLAGS=" > -g -mp=gpu" --with-cc=cc --with-cxx=CC --with-fc=ftn > --with-cudac=/opt/nvidia/hpc_sdk/Linux_x86_64/21.9/compilers/bin/nvcc > --with-debugging=0 --download-hypre=1 --with-cuda=1 --with-cuda-arch=80 > --with-mpiexec=srun --with-batch=0 --download-p4est=1 --with-zlib=1 > --with-make-np=8 > --prefix=/global/cfs/projectdirs/m3904/petsc/current/perlmutter-opt-nvidia21.9 > PETSC_ARCH=arch-perlmutter-opt-nvidia-cuda > > [1]PETSC ERROR: #1 initialize() at > /global/u2/m/madams/petsc/src/sys/objects/device/impls/cupm/cupmdevice.cxx:70 > > [1]PETSC ERROR: #2 getDevice() at > /global/u2/m/madams/petsc/src/sys/objects/device/impls/cupm/cupmdevice.cxx:360 > > [1]PETSC ERROR: #3 PetscDeviceCreate() at > /global/u2/m/madams/petsc/src/sys/objects/device/interface/device.cxx:102 > > [1]PETSC ERROR: #4 PetscDeviceInitializeDefaultDevice_Internal() at > /global/u2/m/madams/petsc/src/sys/objects/device/interface/device.cxx:266 > > [1]PETSC ERROR: #5 PetscDeviceInitialize() at > /global/u2/m/madams/petsc/src/sys/objects/device/interface/device.cxx:227 > > [1]PETSC ERROR: #6 PCCreate_HYPRE() at > /global/u2/m/madams/petsc/src/ksp/pc/impls/hypre/hypre.c:2224 > > [1]PETSC ERROR: #7 PCSetType() at > /global/u2/m/madams/petsc/src/ksp/pc/interface/pcset.c:84 > > [1]PETSC ERROR: #8 PCSetFromOptions() at > /global/u2/m/madams/petsc/src/ksp/pc/interface/pcset.c:154 > > [1]PETSC ERROR: #9 KSPSetFromOptions() at > /global/u2/m/madams/petsc/src/ksp/ksp/interface/itcl.c:356 > > [1]PETSC ERROR: #10 SNESSetFromOptions() at > /global/u2/m/madams/petsc/src/snes/interface/snes.c:1113 > > [1]PETSC ERROR: #11 main() at ex19.c:150 > > [1]PETSC ERROR: PETSc Option Table entries: > > [1]PETSC ERROR: -da_refine 3 > > [1]PETSC ERROR: -dm_mat_type aijcusparse > > [1]PETSC ERROR: -dm_vec_type cuda > > [0]PETSC ERROR: #5 PetscDeviceInitialize() at > /global/u2/m/madams/petsc/src/sys/objects/device/interface/device.cxx:227 > > [0]PETSC ERROR: #6 PCCreate_HYPRE() at > /global/u2/m/madams/petsc/src/ksp/pc/impls/hypre/hypre.c:2224 > > [0]PETSC ERROR: #7 PCSetType() at > /global/u2/m/madams/petsc/src/ksp/pc/interface/pcset.c:84 > > [0]PETSC ERROR: #8 PCSetFromOptions() at > /global/u2/m/madams/petsc/src/ksp/pc/interface/pcset.c:154 > > [0]PETSC ERROR: #9 KSPSetFromOptions() at > /global/u2/m/madams/petsc/src/ksp/ksp/interface/itcl.c:356 > > [0]PETSC ERROR: #10 SNESSetFromOptions() at > /global/u2/m/madams/petsc/src/snes/interface/snes.c:1113 > > [0]PETSC ERROR: #11 main() at ex19.c:150 > > [0]PETSC ERROR: PETSc Option Table entries: > > [0]PETSC ERROR: -da_refine 3 > > [0]PETSC ERROR: -dm_mat_type aijcusparse > > [0]PETSC ERROR: -dm_vec_type cuda > > [0]PETSC ERROR: -ksp_norm_type unpreconditioned > > [0]PETSC ERROR: -nox > > [0]PETSC ERROR: -nox_warning > > [0]PETSC ERROR: -pc_type hypre > > [0]PETSC ERROR: -snes_monitor_short > > [0]PETSC ERROR: -use_gpu_aware_mpi 0 > > [0]PETSC ERROR: ----------------End of Error Message -------send entire > error message to [email protected] > > [1]PETSC ERROR: -ksp_norm_type unpreconditioned > > [1]PETSC ERROR: -nox > > [1]PETSC ERROR: -nox_warning > > [1]PETSC ERROR: -pc_type hypre > > [1]PETSC ERROR: -snes_monitor_short > > [1]PETSC ERROR: -use_gpu_aware_mpi 0 > > [1]PETSC ERROR: ----------------End of Error Message -------send entire > error message to [email protected] > > MPICH Notice [Rank 0] [job id 832277.2] [Thu Dec 9 08:13:50 2021] > [nid003929] - Abort(97) (rank 0 in comm 0): application called > MPI_Abort(MPI_COMM_WORLD, 97) - process 0 > > > > aborting job: > > application called MPI_Abort(MPI_COMM_WORLD, 97) - process 0 > > MPICH Notice [Rank 1] [job id 832277.2] [Thu Dec 9 08:13:50 2021] > [nid003929] - Abort(97) (rank 1 in comm 0): application called > MPI_Abort(MPI_COMM_WORLD, 97) - process 1 > > > > aborting job: > > application called MPI_Abort(MPI_COMM_WORLD, 97) - process 1 > > srun: error: nid003929: task 1: Exited with exit code 255 > > srun: launch/slurm: _step_signal: Terminating StepId=832277.2 > > slurmstepd: error: *** STEP 832277.2 ON nid003929 CANCELLED AT > 2021-12-09T16:13:50 *** > > srun: error: nid003929: task 0: Exited with exit code 255 > /global/homes/m/madams/petsc/src/snes/tutorials > Possible problem with ex19 running with hypre, diffs above > ========================================= > C/C++ example src/snes/tutorials/ex19 run successfully with cuda > Fortran example src/snes/tutorials/ex5f run successfully with 1 MPI process >
