Here is my make log. ==========================================
See documentation/faq.html and documentation/bugreporting.html for help with installation problems. Please send EVERYTHING printed out below when reporting problems To subscribe to the PETSc announcement list, send mail to majordomo at mcs.anl.gov with the message: subscribe petsc-announce To subscribe to the PETSc users mailing list, send mail to majordomo at mcs.anl.gov with the message: subscribe petsc-users ========================================== On Wed Apr 23 15:37:17 EDT 2008 on tabla Machine characteristics: Linux tabla 2.6.22-14-generic #1 SMP Tue Feb 12 07:42:25 UTC 2008 i686 GNU/Linux ----------------------------------------- Using PETSc directory: /home/amit/programs/ParEM/petsc-dev Using PETSc arch: linux-gnu-c-debug ----------------------------------------- PETSC_VERSION_RELEASE 0 PETSC_VERSION_MAJOR 2 PETSC_VERSION_MINOR 3 PETSC_VERSION_SUBMINOR 3 PETSC_VERSION_PATCH 12 PETSC_VERSION_DATE "May, 23, 2007" PETSC_VERSION_PATCH_DATE "unknown" PETSC_VERSION_HG "unknown" ----------------------------------------- Using configure Options: --PETSC_ARCH=linux-gnu-c-debug --with-scalar-type=complex --with-debugging=yes --with-clanguage=cxx --with-mpi=1 --download-mpich=1 --with-metis=1 --download-metis=1 --with-parmetis=1 --download-parmetis=1 --with-superlu_dist=1 --download-superlu_dist=1 --with-mumps=1 --download-blacs=1 --download-scalapack=1 --download-mumps=1 COPTFLAGS="-O3 -march=p4 -mtune=p4 -ffast-math -malign-double -funroll-loops -pipe -fomit-frame-pointer -finline-functions -msse2" CXXOPTFLAGS="-O3 -march=p4 -mtune=p4 -ffast-math -malign-double -funroll-loops -pipe -fomit-frame-pointer -finline-functions -msse2" --with-shared=0 Using configuration flags: #define INCLUDED_PETSCCONF_H #define IS_COLORING_MAX 65535 #define STDC_HEADERS 1 #define MPIU_COLORING_VALUE MPI_UNSIGNED_SHORT #define PETSC_HAVE_SUPERLU_DIST 1 #define PETSC_STATIC_INLINE static inline #define PETSC_HAVE_BLACS 1 #define PETSC_HAVE_MUMPS 1 #define PETSC_DIR_SEPARATOR '/' #define PETSC_HAVE_BLASLAPACK 1 #define PETSC_PATH_SEPARATOR ':' #define PETSC_REPLACE_DIR_SEPARATOR '\\' #define PETSC_HAVE_DOUBLE_ALIGN_MALLOC 1 #define PETSC_RESTRICT __restrict__ #define PETSC_HAVE_X11 1 #define PETSC_HAVE_SOWING 1 #define PETSC_HAVE_SCALAPACK 1 #define PETSC_HAVE_MPI 1 #define PETSC_USE_SOCKET_VIEWER 1 #define PETSC_HAVE_PARMETIS 1 #define PETSC_HAVE_C2HTML 1 #define PETSC_HAVE_FORTRAN 1 #define PETSC_HAVE_STRING_H 1 #define PETSC_HAVE_SYS_TYPES_H 1 #define PETSC_HAVE_ENDIAN_H 1 #define PETSC_HAVE_SYS_PROCFS_H 1 #define PETSC_HAVE_LINUX_KERNEL_H 1 #define PETSC_HAVE_TIME_H 1 #define PETSC_HAVE_MATH_H 1 #define PETSC_HAVE_STDLIB_H 1 #define PETSC_HAVE_SYS_PARAM_H 1 #define PETSC_HAVE_SYS_SOCKET_H 1 #define PETSC_HAVE_UNISTD_H 1 #define PETSC_HAVE_SYS_WAIT_H 1 #define PETSC_HAVE_LIMITS_H 1 #define PETSC_HAVE_SEARCH_H 1 #define PETSC_HAVE_NETINET_IN_H 1 #define PETSC_HAVE_FLOAT_H 1 #define PETSC_HAVE_SYS_SYSINFO_H 1 #define PETSC_HAVE_SYS_RESOURCE_H 1 #define PETSC_HAVE_SYS_TIMES_H 1 #define PETSC_HAVE_NETDB_H 1 #define PETSC_HAVE_MALLOC_H 1 #define PETSC_HAVE_PWD_H 1 #define PETSC_HAVE_FCNTL_H 1 #define PETSC_HAVE_STRINGS_H 1 #define PETSC_HAVE_MEMORY_H 1 #define PETSC_TIME_WITH_SYS_TIME 1 #define PETSC_HAVE_SYS_TIME_H 1 #define PETSC_HAVE_SYS_UTSNAME_H 1 #define PETSC_USING_F90 1 #define PETSC_PRINTF_FORMAT_CHECK(A,B) __attribute__((format (printf, A, B))) #define PETSC_C_STATIC_INLINE static inline #define PETSC_HAVE_FORTRAN_UNDERSCORE 1 #define PETSC_HAVE_CXX_NAMESPACE 1 #define PETSC_C_RESTRICT __restrict__ #define PETSC_USE_F90_SRC_IMPL 1 #define PETSC_CXX_RESTRICT __restrict__ #define PETSC_CXX_STATIC_INLINE static inline #define PETSC_HAVE_LIBBLAS 1 #define PETSC_HAVE_LIBDMUMPS 1 #define PETSC_HAVE_LIBZMUMPS 1 #define PETSC_HAVE_LIBSCALAPACK 1 #define PETSC_HAVE_LIBM 1 #define PETSC_HAVE_LIBMETIS 1 #define PETSC_HAVE_LIBLAPACK 1 #define PETSC_HAVE_LIBCMUMPS 1 #define PETSC_HAVE_LIBSMUMPS 1 #define PETSC_HAVE_LIBGCC_S 1 #define PETSC_HAVE_LIBPORD 1 #define PETSC_HAVE_LIBGFORTRANBEGIN 1 #define PETSC_HAVE_ERF 1 #define PETSC_HAVE_LIBSUPERLU_DIST_2 1 #define PETSC_HAVE_LIBBLACS 1 #define PETSC_HAVE_LIBPARMETIS 1 #define PETSC_HAVE_LIBGFORTRAN 1 #define PETSC_ARCH_NAME "linux-gnu-c-debug" #define PETSC_ARCH linux #define PETSC_DIR /home/amit/programs/ParEM/petsc-dev #define PETSC_CLANGUAGE_CXX 1 #define PETSC_USE_ERRORCHECKING 1 #define PETSC_MISSING_DREAL 1 #define PETSC_SIZEOF_MPI_COMM 4 #define PETSC_BITS_PER_BYTE 8 #define PETSC_SIZEOF_MPI_FINT 4 #define PETSC_SIZEOF_VOID_P 4 #define PETSC_RETSIGTYPE void #define PETSC_HAVE_CXX_COMPLEX 1 #define PETSC_SIZEOF_LONG 4 #define PETSC_USE_FORTRANKIND 1 #define PETSC_SIZEOF_SIZE_T 4 #define PETSC_SIZEOF_CHAR 1 #define PETSC_SIZEOF_DOUBLE 8 #define PETSC_SIZEOF_FLOAT 4 #define PETSC_HAVE_C99_COMPLEX 1 #define PETSC_SIZEOF_INT 4 #define PETSC_SIZEOF_LONG_LONG 8 #define PETSC_SIZEOF_SHORT 2 #define PETSC_HAVE_STRCASECMP 1 #define PETSC_HAVE_ISNAN 1 #define PETSC_HAVE_POPEN 1 #define PETSC_HAVE_SIGSET 1 #define PETSC_HAVE_GETWD 1 #define PETSC_HAVE_TIMES 1 #define PETSC_HAVE_SNPRINTF 1 #define PETSC_HAVE_GETPWUID 1 #define PETSC_HAVE_ISINF 1 #define PETSC_HAVE_GETHOSTBYNAME 1 #define PETSC_HAVE_SLEEP 1 #define PETSC_HAVE_FORK 1 #define PETSC_HAVE_RAND 1 #define PETSC_HAVE_GETTIMEOFDAY 1 #define PETSC_HAVE_UNAME 1 #define PETSC_HAVE_GETHOSTNAME 1 #define PETSC_HAVE_MKSTEMP 1 #define PETSC_HAVE_SIGACTION 1 #define PETSC_HAVE_DRAND48 1 #define PETSC_HAVE_VA_COPY 1 #define PETSC_HAVE_CLOCK 1 #define PETSC_HAVE_ACCESS 1 #define PETSC_HAVE_SIGNAL 1 #define PETSC_HAVE_GETRUSAGE 1 #define PETSC_HAVE_MEMALIGN 1 #define PETSC_HAVE_GETDOMAINNAME 1 #define PETSC_HAVE_TIME 1 #define PETSC_HAVE_LSEEK 1 #define PETSC_HAVE_SOCKET 1 #define PETSC_HAVE_SYSINFO 1 #define PETSC_HAVE_READLINK 1 #define PETSC_HAVE_REALPATH 1 #define PETSC_HAVE_MEMMOVE 1 #define PETSC_HAVE__GFORTRAN_IARGC 1 #define PETSC_SIGNAL_CAST #define PETSC_HAVE_GETCWD 1 #define PETSC_HAVE_VPRINTF 1 #define PETSC_HAVE_BZERO 1 #define PETSC_HAVE_GETPAGESIZE 1 #define PETSC_USE_COMPLEX 1 #define PETSC_USE_GDB_DEBUGGER 1 #define PETSC_HAVE_GFORTRAN_IARGC 1 #define PETSC_USE_DEBUG 1 #define PETSC_USE_INFO 1 #define PETSC_USE_LOG 1 #define PETSC_IS_COLOR_VALUE_TYPE short #define PETSC_USE_CTABLE 1 #define PETSC_USE_PROC_FOR_SIZE 1 #define PETSC_HAVE_MPI_COMM_C2F 1 #define PETSC_HAVE_MPI_COMM_F2C 1 #define PETSC_HAVE_MPI_FINT 1 #define PETSC_HAVE_MPI_F90MODULE 1 #define PETSC_HAVE_MPI_ALLTOALLW 1 #define PETSC_HAVE_MPI_COMM_SPAWN 1 #define PETSC_HAVE_MPI_WIN_CREATE 1 #define PETSC_HAVE_MPI_FINALIZED 1 #define HAVE_GZIP 1 #define PETSC_BLASLAPACK_UNDERSCORE 1 ----------------------------------------- Using include paths: -I/home/amit/programs/ParEM/petsc-dev -I/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/include -I/home/amit/programs/ParEM/petsc-dev/include -I/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/include -I/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/include -I/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/include -I/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/include ------------------------------------------ Using C/C++ compiler: /home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/bin/mpicxx C/C++ Compiler version: Using Fortran compiler: gfortran -g Fortran Compiler version: ----------------------------------------- Using C/C++ linker: Using Fortran linker: /home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/bin/mpif90 ----------------------------------------- Using libraries: -Wl,-rpath,/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib -L/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib -lpetscts -lpetscsnes -lpetscksp -lpetscdm -lpetscmat -lpetscvec -lpetsc -lX11 -Wl,-rpath,/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib -L/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib -lsuperlu_dist_2.2 -Wl,-rpath,/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib -L/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib -lparmetis -lmetis -Wl,-rpath,/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib -L/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib -lcmumps -ldmumps -lsmumps -lzmumps -lpord -Wl,-rpath,/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib -L/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib -lscalapack -Wl,-rpath,/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib -L/home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib -lblacs -llapack -lblas -L/usr/lib/gcc/i486-linux-gnu/4.1.3 -L/lib -lgcc_s -lgfortranbegin -lgfortran -lm -L/usr/lib/gcc/i486-linux-gnu/4.2.1 -lm -lstdc++ -lstdc++ -lgcc_s ------------------------------------------ Using mpiexec: /home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/bin/mpiexec ========================================== /bin/rm -f -f /home/amit/programs/ParEM/petsc-dev/linux-gnu-c-debug/lib/libpetsc*.* BEGINNING TO COMPILE LIBRARIES IN ALL DIRECTORIES ========================================= libfast in: /home/amit/programs/ParEM/petsc-dev/src libfast in: /home/amit/programs/ParEM/petsc-dev/src/inline libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/socket libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/socket/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/ascii libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/ascii/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/ascii/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/binary libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/binary/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/binary/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/binary/f90-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/string libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/string/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/draw libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/draw/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/draw/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/impls/vu libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/examples libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/examples/tutorials libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/examples/tests libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/interface libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/interface/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/viewer/interface/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/interface libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/interface/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/interface/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/impls libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/impls/x libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/impls/x/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/impls/ps libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/examples libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/examples/tests libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/examples/tutorials libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/utils libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/utils/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/draw/utils/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/error libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/error/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/error/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/dll libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/dll/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/fileio libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/fileio/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/fileio/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/memory libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/memory/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/memory/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/objects libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/objects/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/objects/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/time libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/time/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/utils libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/utils/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/utils/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/plog libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/plog/utils libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/plog/utils/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/plog/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/plog/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/random libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/random/interface libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/random/interface/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/random/examples libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/random/impls libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/random/impls/rand libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/random/impls/rand48 libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/bag libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/bag/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/bag/f90-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/examples libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/examples/tests libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/examples/tutorials libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/verbose libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/verbose/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/verbose/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/f90-src libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/f90-src/fsrc make[8]: *** No rule to make target `libf'. Stop. libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/f90-mod make[7]: *** No rule to make target `petscmod.o'. Stop. make[6]: *** [buildmod] Error 2 make[5]: [libfast] Error 2 (ignored) libfast in: /home/amit/programs/ParEM/petsc-dev/src/sys/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/utils libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/utils/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/utils/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/interface libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/interface/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/interface/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/interface/f90-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/impls libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/impls/seq libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/impls/seq/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/impls/seq/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/impls/mpi libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/impls/mpi/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/impls/mpi/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/impls/shared libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/impls/shared/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/examples libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/examples/tests libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/vec/examples/tutorials libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/interface libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/interface/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/interface/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/interface/f90-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/impls libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/impls/general libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/impls/general/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/impls/stride libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/impls/stride/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/impls/block libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/impls/block/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/impls/block/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/impls/f90-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/examples libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/examples/tests libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/examples/tutorials libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/utils libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/utils/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/utils/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/is/utils/f90-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/pf libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/pf/interface libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/pf/interface/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/pf/impls libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/pf/impls/constant libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/pf/impls/string libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/pf/examples libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/pf/examples/tutorials libfast in: /home/amit/programs/ParEM/petsc-dev/src/vec/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/interface libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/interface/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/interface/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/interface/f90-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/dense libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/dense/seq libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/dense/seq/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/dense/mpi libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/dense/mpi/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/dense/mpi/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/seq libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/seq/csrperm libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/seq/crl libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/seq/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/seq/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/mpi libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/mpi/superlu_dist libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/mpi/mumps libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/mpi/csrperm libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/mpi/crl libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/mpi/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/mpi/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/aij/aij libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/shell libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/shell/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/shell/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/baij libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/baij/seq libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/baij/seq/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/baij/seq/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/baij/mpi libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/baij/mpi/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/baij/mpi/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/adj libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/adj/mpi libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/adj/mpi/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/maij libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/is libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/is/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/sbaij libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/sbaij/seq libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/sbaij/seq/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/sbaij/seq/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/sbaij/mpi libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/sbaij/mpi/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/normal libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/normal/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/lrc libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/lrc/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/scatter libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/scatter/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/blockmat libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/blockmat/seq libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/composite libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/composite/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/mffd libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/mffd/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/impls/mffd/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/examples libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/examples/tests libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/examples/tutorials libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/utils libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/utils/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/utils/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/matfd libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/matfd/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/matfd/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/partition libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/partition/impls libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/partition/impls/pmetis libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/partition/impls/pmetis/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/partition/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/partition/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/order libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/order/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/order/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/color libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/color/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/mat/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/interface libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/interface/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/interface/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/jacobi libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/jacobi/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/none libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/sor libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/sor/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/shell libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/shell/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/bjacobi libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/bjacobi/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/bjacobi/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/mg libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/mg/dmmg libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/mg/dmmg/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/mg/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/mg/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/eisens libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/eisens/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/asm libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/asm/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/asm/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/ksp libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/ksp/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/composite libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/composite/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/composite/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/redundant libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/redundant/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/is libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/is/nn libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/pbjacobi libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/mat libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/fieldsplit libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/fieldsplit/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/factor libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/factor/lu libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/factor/lu/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/factor/lu/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/factor/ilu libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/factor/ilu/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/factor/icc libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/factor/cholesky libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/factor/cholesky/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/factor/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/galerkin libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/galerkin/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/openmp libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/asa libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/impls/cp libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/examples libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/examples/tests libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/pc/examples/tutorials libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/interface iguess.c: In function ???PetscErrorCode KSPFischerGuessFormGuess_Method1(KSPFischerGuess_Method1*, _p_Vec*, _p_Vec*)???: iguess.c:79: warning: cannot pass objects of non-POD type ???struct std::complex<double>??? through ???...???; call will abort at runtime iguess.c: In function ???PetscErrorCode KSPFischerGuessFormGuess_Method2(KSPFischerGuess_Method2*, _p_Vec*, _p_Vec*)???: iguess.c:198: warning: cannot pass objects of non-POD type ???struct std::complex<double>??? through ???...???; call will abort at runtime libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/interface/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/interface/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/interface/f90-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cr libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/bcgs libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/bcgsl libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/bcgsl/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cg libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cg/cgne libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cg/gltr libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cg/gltr/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cg/nash libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cg/nash/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cg/stcg libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cg/stcg/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cg/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cgs libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/gmres libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/gmres/lgmres libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/gmres/fgmres libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/gmres/fgmres/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/gmres/fgmres/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/gmres/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cheby libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/cheby/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/rich libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/rich/ftn-autolibfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/lsqr libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/preonly libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/tcqmr libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/tfqmr libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/qcg libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/qcg/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/bicg libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/minres libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/symmlq libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/impls/lcd libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/examples libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/examples/tests libfast in: /home/amit/programs/ParEM/petsc-dev/src/ksp/ksp/examples/tutorials libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/interface libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/interface/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/interface/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/interface/f90-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/mf libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/mf/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/impls libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/impls/ls libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/impls/ls/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/impls/ls/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/impls/tr libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/impls/test libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/impls/picard libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/examples libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/examples/tests libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/examples/tutorials libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/examples/tutorials/ex10d libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/utils libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/utils/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/utils/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/snes/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/interface libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/interface/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/interface/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/impls libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/impls/explicit libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/impls/explicit/euler libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/impls/explicit/rk libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/impls/explicit/rk/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/impls/implicit libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/impls/implicit/beuler libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/impls/implicit/cn libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/impls/pseudo libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/impls/pseudo/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/examples libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/examples/tests libfast in: /home/amit/programs/ParEM/petsc-dev/src/ts/examples/tutorials libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/interface libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/interface/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/interface/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/impls libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/impls/basic libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/impls/basic/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/impls/mapping libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/impls/mapping/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/impls/mapping/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/examples libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/examples/tests libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ao/examples/tutorials libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/src libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/src/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/src/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/src/f90-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/examples libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/examples/tests libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/examples/tutorials libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/utils libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/utils/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/utils/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/da/utils/f90-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/adda libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/adda/examples libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/adda/examples/tests libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/adda/ftn-auto libfast in: /home/amit/programs/ParEM/petsc-dev/src/dm/ftn-custom libfast in: /home/amit/programs/ParEM/petsc-dev/src/contrib libfast in: /home/amit/programs/ParEM/petsc-dev/src/contrib/fun3d libfast in: /home/amit/programs/ParEM/petsc-dev/src/benchmarks libfast in: /home/amit/programs/ParEM/petsc-dev/src/fortran libfast in: /home/amit/programs/ParEM/petsc-dev/src/fortran/fsrc make[7]: *** No rule to make target `libf'. Stop. libfast in: /home/amit/programs/ParEM/petsc-dev/src/docs libfast in: /home/amit/programs/ParEM/petsc-dev/include libfast in: /home/amit/programs/ParEM/petsc-dev/include/finclude libfast in: /home/amit/programs/ParEM/petsc-dev/tutorials libfast in: /home/amit/programs/ParEM/petsc-dev/tutorials/multiphysics Completed building libraries ========================================= Shared libraries disabled ******************************************************************** Error during compile, check linux-gnu-c-debug/conf/make.log Send it and linux-gnu-c-debug/conf/configure.log to petsc-maint at mcs.anl.gov ******************************************************************** make: [all] Error 1 (ignored) Running test examples to verify correct installation make[2]: [ex19.PETSc] Error 2 (ignored) make[2]: [ex5f.PETSc] Error 2 (ignored) --------------Error detected during compile or link!----------------------- See http://www.mcs.anl.gov/petsc/petsc-2/documentation/troubleshooting.html gfortran -I/home/amit/programs/ParEM/petsc-dev/include/finclude -c -o ex5f.o ex5f.F In file included from ex5f.F:43: ex5f.h:32: error: include/finclude/petsc.h: No such file or directory ex5f.h:33: error: include/finclude/petscvec.h: No such file or directory ex5f.h:34: error: include/finclude/petscda.h: No such file or directory ex5f.h:35: error: include/finclude/petscis.h: No such file or directory ex5f.h:36: error: include/finclude/petscmat.h: No such file or directory ex5f.h:37: error: include/finclude/petscksp.h: No such file or directory ex5f.h:38: error: include/finclude/petscpc.h: No such file or directory ex5f.h:39: error: include/finclude/petscsnes.h: No such file or directory make[3]: *** [ex5f.o] Error 1 Completed test examples I guess the tests fail because the program looks for include/finclude/petsc.h in /include/finclude. What about libf ? "Matthew Knepley" <knepley at gmail.co m> To Sent by: petsc-users at mcs.anl.gov owner-petsc-users cc @mcs.anl.gov No Phone Info Subject Available Re: Multilevel solver 04/23/2008 02:43 PM Please respond to petsc-users at mcs.a nl.gov On Wed, Apr 23, 2008 at 1:32 PM, <Amit.Itagi at seagate.com> wrote: > Barry, > > Is the installation of petsc-dev different from the installation of the > 2.3.3 release ? I ran the config. But the folder tree seems to be > different. Hence, make is giving problems. 1) Always always send the error log. I cannot tell anything from the description "problems". 2) Some things have moved, but of course, make will work with the new organization. Matt > Amit > > Barry Smith > <bsmith at mcs.anl.g > ov> To > Sent by: petsc-users at mcs.anl.gov > owner-petsc-users cc > @mcs.anl.gov > No Phone Info Subject > Available Re: Multilevel solver > > > 04/22/2008 10:08 > PM > > > Please respond to > petsc-users at mcs.a > nl.gov > > > > > > > Amit, > > Using a a PCSHELL should be fine (it can be used with GMRES), > my guess is there is a memory corruption error somewhere that is > causing the crash. This could be tracked down with www.valgrind.com > > Another way to you could implement this is with some very recent > additions I made to PCFIELDSPLIT that are in petsc-dev > (http://www-unix.mcs.anl.gov/petsc/petsc-as/developers/index.html) > With this you would chose > PCSetType(pc,PCFIELDSPLIT > PCFieldSplitSetIS(pc,is1 > PCFieldSplitSetIS(pc,is2 > PCFieldSplitSetType(pc,PC_COMPOSITE_SYMMETRIC_MULTIPLICATIVE > to use LU on A11 use the command line options > -fieldsplit_0_pc_type lu -fieldsplit_0_ksp_type preonly > and SOR on A22 > -fieldsplit_1_pc_type sor -fieldsplit_1_ksp_type preonly - > fieldsplit_1_pc_sor_lits <lits> where > <its> is the number of iterations you want to use block A22 > > is1 is the IS that contains the indices for all the vector entries in > the 1 block while is2 is all indices in the > vector for the 2 block. You can use ISCreateGeneral() to create these. > > Probably it is easiest just to try this out. > > Barry > > > On Apr 22, 2008, at 8:45 PM, Amit.Itagi at seagate.com wrote: > > > > > Hi, > > > > I am trying to implement a multilevel method for an EM problem. The > > reference is : "Comparison of hierarchical basis functions for > > efficient > > multilevel solvers", P. Ingelstrom, V. Hill and R. Dyczij-Edlinger, > > IET > > Sci. Meas. Technol. 2007, 1(1), pp 48-52. > > > > Here is the summary: > > > > The matrix equation Ax=b is solved using GMRES with a multilevel > > pre-conditioner. A has a block structure. > > > > A11 A12 * x1 = b1 > > A21 A22 x2 b2 > > > > A11 is mxm and A33 is nxn, where m is not equal to n. > > > > Step 1 : Solve A11 * e1 = b1 (parallel LU using > > superLU or > > MUMPS) > > > > Step 2: Solve A22 * e2 =b2-A21*e1 (might either user > > a SOR > > solver or a parallel LU) > > > > Step 3: Solve A11* e1 = b1-A12*e2 (parallel LU) > > > > This gives the approximate solution to > > > > A11 A12 * e1 = b1 > > A21 A22 e2 b2 > > > > and is used as the pre-conditioner for the GMRES. > > > > > > Which PetSc method can implement this pre-conditioner ? I tried a > > PCSHELL > > type PC. With Hong's help, I also got the parallel LU to work > > withSuperLU/MUMPS. My program runs successfully on multiple > > processes on a > > single machine. But when I submit the program over multiple > > machines, I get > > a crash in the PCApply routine after several GMRES iterations. I > > think this > > has to do with using PCSHELL with GMRES (which is not a good idea). Is > > there a different way to implement this ? Does this resemble the usage > > pattern of one of the AMG preconditioners ? > > > > > > Thanks > > > > Rgds, > > Amit > > > > > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener
