hwloc is giving this warning on your machine: hwloc/linux: Ignoring PCI device with non-16bit domain. Pass --enable-32bits-pci-domain to configure to support such devices (warning: it would break the library ABI, don't enable unless really needed).
The PETSc results are fine, so you can use your installation. I have not seen the warning before. Thanks, Matt On Tue, Oct 11, 2022 at 12:32 AM Sijie Zhang <zhan2...@purdue.edu> wrote: > Hi, > > When I try to install petsc on my PC and run the make all check commend it > has the following error. Can you help me to troubleshoot that? > > Thanks. > > Sijie > > ++++++++++++++++++++++++++++++++++++++++++++++++ > Running check examples to verify correct installation > Using PETSC_DIR=/home/zhangsijie1995/Documents/Packages/petsc-3.18.0 and > PETSC_ARCH=arch-linux-c-debug > Possible error running C/C++ src/snes/tutorials/ex19 with 1 MPI process > See https://petsc.org/release/faq/ > hwloc/linux: Ignoring PCI device with non-16bit domain. > Pass --enable-32bits-pci-domain to configure to support such devices > (warning: it would break the library ABI, don't enable unless really > needed). > lid velocity = 0.0016, prandtl # = 1., grashof # = 1. > Number of SNES iterations = 2 > Possible error running C/C++ src/snes/tutorials/ex19 with 2 MPI processes > See https://petsc.org/release/faq/ > hwloc/linux: Ignoring PCI device with non-16bit domain. > Pass --enable-32bits-pci-domain to configure to support such devices > (warning: it would break the library ABI, don't enable unless really > needed). > hwloc/linux: Ignoring PCI device with non-16bit domain. > Pass --enable-32bits-pci-domain to configure to support such devices > (warning: it would break the library ABI, don't enable unless really > needed). > lid velocity = 0.0016, prandtl # = 1., grashof # = 1. > Number of SNES iterations = 2 > Possible error running Fortran example src/snes/tutorials/ex5f with 1 MPI > process > See https://petsc.org/release/faq/ > hwloc/linux: Ignoring PCI device with non-16bit domain. > Pass --enable-32bits-pci-domain to configure to support such devices > (warning: it would break the library ABI, don't enable unless really > needed). > Number of SNES iterations = 3 > Completed test examples > Error while running make check > gmake[1]: *** [makefile:149: check] Error 1 > make: *** [GNUmakefile:17: check] Error 2 > ++++++++++++++++++++++++++++++++++++++++++++++++ > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener https://www.cse.buffalo.edu/~knepley/ <http://www.cse.buffalo.edu/~knepley/>