Christian, I am not an expert, but I managed to install PYMVPA on my Snow Leopard by doing
sudo port install py26-pil py26-numpy py26-scipy py26-ipython py26-matplotlib +cairo+latex+tkinter py26-pyobjc2-cocoa python_select sudo python_select python26 And then sudo port install py26-pymvpa +scipy +pynifti +hcluster +libsvm +matplotlib +pywavelet Although when I tried to install PYMVPA on Leopard, I encountered the same problem as you (the installation involves py26 even though I explicitly aske it to involve py25). Good luck, Anna. On Tue, Dec 8, 2009 at 4:36 AM, Christian Fiebach <[email protected] > wrote: > This problem is not existing any more - installation proceeded to the point > that > manual installation of Shogun is asked for. > > I would be interested in knowing why the installation seems to involve both > python25 > and python26 - is this correct? > > Does it make sense to install (as did a previous post on this list) the > whole package > based on python26? > > Thanks a lot in advance! Christian > > Am 05.12.2009 um 10:17 schrieb [email protected]: > > Dear pyMVPA-experts, >> >> I am encountering problems installing pyMVPA using MacPorts on >> a Macbook Pro (15') with Mac OS X snow leopard. The output is >> as follows, the error message is somehow not informative enough >> for me to solve the problem on my own. >> (In the first call of the install command, I pasted it from the >> install site and the last two commands (+matplotlib and +pywavelet) >> were pasted into a separate line. I don't know if the incomplete >> call without matplotlib and pywavelet is the source of the error >> or whether the problem happens somewhere else.) >> >> I am very thankful for your help in advance!!! Christian >> >> >> Christian-Fiebachs-MacBook-Pro-15:~ fiebach$ sudo port install py25-pymvpa >> +scipy +pynifti +hcluster +libsvm +matplotlib +pywavelet >> ---> Computing dependencies for py25-pymvpa >> ---> Fetching gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> http://mirrors.ibiblio.org/pub/mirrors/gnu/ftp/gnu/gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> http://mirrors.kernel.org/gnu/gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> http://www.mirrorservice.org/sites/ftp.gnu.org/gnu/gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> ftp://ftp.funet.fi/pub/gnu/prep/gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> ftp://ftp.kddlabs.co.jp/pub/gnu/gnu/gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> ftp://ftp.kddlabs.co.jp/pub/gnu/old-gnu/gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> ftp://ftp.dti.ad.jp/pub/GNU/gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> ftp://ftp.informatik.hu-berlin.de/pub/gnu/gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> ftp://ftp.lip6.fr/pub/gnu/gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> ftp://ftp.chg.ru/pub/gnu/gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> http://mirror.internode.on.net/pub/gnu/gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> http://mirror.pacific.net.au/pub1/gnu/gnu/gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> http://mirror.aarnet.edu.au/pub/GNU/gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> ftp://ftp.unicamp.br/pub/gnu/gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> ftp://ftp.gnu.org/gnu/gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> http://ftp.gnu.org/gnu/gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> ftp://ftp.gnu.org/old-gnu/gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> http://distfiles.macports.org/gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> http://arn.se.distfiles.macports.org/gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> http://aarnet.au.distfiles.macports.org/pub/macports/mpdistfiles/gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> http://svn.macports.org/repository/macports/distfiles/gzip >> ---> Attempting to fetch gzip-1.3.12.tar.gz from >> http://svn.macports.org/repository/macports/distfiles/general/ >> Error: Target org.macports.fetch returned: fetch failed >> Error: The following dependencies failed to build: py25-hcluster >> py25-numpy atlas gzip fftw-3 py25-nose py25-setuptools python25 db46 gdbm >> readline sqlite3 tk Xft2 fontconfig freetype xrender xorg-libX11 groff >> xorg-bigreqsproto xorg-inputproto xorg-kbproto xorg-libXau xorg-xproto >> xorg-libXdmcp xorg-util-macros xorg-xcmiscproto xorg-xextproto >> xorg-xf86bigfontproto xorg-xtrans xorg-renderproto tcl xorg-libXScrnSaver >> xorg-libXext xorg-scrnsaverproto py25-matplotlib libpng py25-configobj >> py25-dateutil py25-tz py25-pyobjc-cocoa py25-pyobjc py25-py2app >> py25-altgraph py25-bdist_mpkg py25-macholib py25-modulegraph py25-pyobjc2 >> py25-pyobjc2-cocoa py25-pynifti nifticlib cmake libidn swig-python bison m4 >> gsed python_select swig py25-pywavelets py25-scipy SuiteSparse metis shogun >> glpk py26-numpy py26-nose py26-setuptools python26 >> Error: Status 1 encountered during processing. >> Christian-Fiebachs-MacBook-Pro-15:~ fiebach$ >> >> >> _______________________________________________ >> Pkg-ExpPsy-PyMVPA mailing list >> [email protected] >> http://lists.alioth.debian.org/mailman/listinfo/pkg-exppsy-pymvpa >> >> > > > > ------------------------------------------------------------- > Prof. Dr. Christian Fiebach > Dept. of Psychology, University of Heidelberg > Hauptstr. 47-51; D-69117 Germany > Tel.: ++49-(0)6221-547371 > http://fimlab.uni-hd.de > ------------------------------------------------------------- > > > > > > _______________________________________________ > Pkg-ExpPsy-PyMVPA mailing list > [email protected] > http://lists.alioth.debian.org/mailman/listinfo/pkg-exppsy-pymvpa >
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