Hi I have recently moved to Ubuntu platform. I tried to install PyMVPA on ubuntu using synaptic package manager. I installed 1) Python-mvpa 2) python-mvpa-lib and 3) python-mvpa-doc.
In Ipython, I am able to import mvpa but can't import mvpa.mapper.mdp_adaptor (it doesn't have that module). I get following error. Please help me. ============================================= In [6]: import mvpa.mappers.mdp_adpator --------------------------------------------------------------------------- ImportError Traceback (most recent call last) /home/rahul/<ipython console> in <module>() ImportError: No module named mdp_adpator =============================================== Here is mvpa.wtf() output, incase you need it to debug. Thanks In [9]: mvpa.wtf() Out[9]: Current date: 2011-04-16 13:01 PyMVPA: Version: 0.4.5.dev Path: /usr/lib/pymodules/python2.6/mvpa/__init__.py Version control (GIT): GIT information could not be obtained due "/usr/lib/pymodules/python2.6/mvpa/.. is not under GIT" SYSTEM: OS: posix Linux 2.6.35-28-generic #49-Ubuntu SMP Tue Mar 1 14:39:03 UTC 2011 Distribution: Ubuntu/10.10/maverick EXTERNALS: Present: cPickle, ctypes, good scipy.stats.rdist, good scipy.stats.rv_discrete.ppf, griddata, gzip, libsvm, libsvm verbosity control, lxml, matplotlib, mdp, mdp ge 2.4, nifti, nifti ge 0.20090205.1, nose, numpy, openopt, pylab, pylab plottable, pywt, pywt wp reconstruct, reportlab, running ipython env, scipy, sg ge 0.6.4, sg_fixedcachesize, shogun, shogun.krr, shogun.mpd Absent: atlas_fsl, atlas_pymvpa, elasticnet, glmnet, hcluster, lars, pywt wp reconstruct fixed, rpy, shogun.lightsvm, shogun.svrlight, weave Versions of critical externals: ctypes : 1.1.0 matplotlib : 0.99.3 lxml : 2.2.6 nifti : 0.20100412.1 numpy : 1.3.0 openopt : 0.27 openopt : failed to query due to "No module named openopt" pywt : 0.2.0 scipy : 0.7.2 shogun : v0.9.3_r4889_2010-05-27_20:52_ Matplotlib backend: TkAgg RUNTIME: PyMVPA Environment Variables: PyMVPA Runtime Configuration: [externals] have griddata = yes have good scipy.stats.rdist = yes have pylab plottable = yes have pywt wp reconstruct = yes have mdp = yes have lxml = yes have running ipython env = yes have sg_fixedcachesize = yes have elasticnet = no have shogun.mpd = yes have matplotlib = yes have pywt wp reconstruct fixed = no have scipy = yes have reportlab = yes have openopt = yes have libsvm = yes have shogun.krr = yes have nifti ge 0.20090205.1 = yes have nose = yes have weave = no have atlas_fsl = no have ctypes = yes have hcluster = no have sg ge 0.6.4 = yes have good scipy.stats.rv_discrete.ppf = yes have libsvm verbosity control = yes have mdp ge 2.4 = yes have shogun.svrlight = no have rpy = no have shogun = yes have glmnet = no have lars = no have nifti = yes have atlas_pymvpa = no have cpickle = yes have numpy = yes have pylab = yes have shogun.lightsvm = no have pywt = yes have gzip = yes [general] verbose = 1 Process Information: Name: ipython State: R (running) Tgid: 9578 Pid: 9578 PPid: 8931 TracerPid: 0 Uid: 1000 1000 1000 1000 Gid: 1000 1000 1000 1000 FDSize: 256 Groups: 4 20 24 46 111 119 122 1000 VmPeak: 414480 kB VmSize: 414480 kB VmLck: 0 kB VmHWM: 71560 kB VmRSS: 71560 kB VmData: 61848 kB VmStk: 264 kB VmExe: 2152 kB VmLib: 62624 kB VmPTE: 788 kB VmSwap: 0 kB Threads: 2 SigQ: 1/16382 SigPnd: 0000000000000000 ShdPnd: 0000000000000000 SigBlk: 0000000000000000 SigIgn: 0000000001001000 SigCgt: 0000000180000002 CapInh: 0000000000000000 CapPrm: 0000000000000000 CapEff: 0000000000000000 CapBnd: ffffffffffffffff Cpus_allowed: 3 Cpus_allowed_list: 0-1 Mems_allowed: 00000000,00000001 Mems_allowed_list: 0 voluntary_ctxt_switches: 1613 nonvoluntary_ctxt_switches: 379 _______________________________________________ Pkg-ExpPsy-PyMVPA mailing list [email protected] http://lists.alioth.debian.org/mailman/listinfo/pkg-exppsy-pymvpa
