Thanks to Tiziano's dedication to work on holidays -- there is an updated snapshot package of MDP available from #NeuroDebian (for a subset of Debian/Ubuntu releases) fixing PyMVPA import issues.
Enjoy! On Thu, 05 Apr 2012, Yaroslav Halchenko wrote: > d'oh -- I thought that we finally uploaded mdp which fixes this issue... > I guess I was wrong (upload is coming though...) > meanwhile -- a configurational workaround is to disable MDP bindings > (they aren't used in the tutorial anyways) -- just edit your ~/.pymvpa2.cfg > and > add > [externals] > have mdp = no > that should prevent it from check if MDP is available etc > On Thu, 05 Apr 2012, Emanuele Olivetti wrote: > > > File "<string>", line 1, in <module> > > > File "/usr/lib/pymodules/python2.6/mdp/__init__.py", line 166, in > > > <module> > > > import nodes > > > File "/usr/lib/pymodules/python2.6/mdp/nodes/__init__.py", line 54, in > > > <module> > > > del convolution_nodes > > >NameError: name 'convolution_nodes' is not defined > > >----- > > >As far as I understand, besides the warning on the scikits->sklearn > > >renaming, there is > > >an issue with MDP. I am digging it but in case you already know that I am > > >sending this message immediately. > > After a little digging I found out that the package python-mdp has some > > other > > bigger issues: even "import mdp" fails. This is quite unexpected... > > This tiny change in MDP seems to solve the issue of my previous message > > though. > > ------------------------------------------- > > --- __init__.py.original 2012-04-05 07:46:13.000000000 -0400 > > +++ __init__.py 2012-04-05 07:48:40.000000000 -0400 > > @@ -51,17 +51,17 @@ > > if numx_description == 'scipy': > > from convolution_nodes import Convolution2DNode > > __all__ += ['Convolution2DNode'] > > - del convolution_nodes > > + # del convolution_nodes > > if config.has_shogun: > > from shogun_svm_classifier import ShogunSVMClassifier > > __all__ += ['ShogunSVMClassifier'] > > - del shogun_svm_classifier > > + # del shogun_svm_classifier > > if config.has_libsvm: > > from libsvm_classifier import LibSVMClassifier > > __all__ += ['LibSVMClassifier'] > > - del libsvm_classifier > > + # del libsvm_classifier > > if config.has_scikits: > > import scikits_nodes > > -------------------------------------------- > > Best, > > Emanuele > > _______________________________________________ > > Pkg-ExpPsy-PyMVPA mailing list > > [email protected] > > http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-exppsy-pymvpa -- =------------------------------------------------------------------= Keep in touch www.onerussian.com Yaroslav Halchenko www.ohloh.net/accounts/yarikoptic _______________________________________________ Pkg-ExpPsy-PyMVPA mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-exppsy-pymvpa
