Pierre-Emmanuel Andr?:
> Updated diff attached.
I tried another test build, but that was derailed by the libcroco
issue, so I don't have full results. A partial result is that
databases/postgresql-plr
geo/pgpointcloud
fail to build. See the attached log files.
I'll try yet another test build some time later this week.
--
Christian "naddy" Weisgerber na...@mips.inka.de
>>> Building on amd64-2 under databases/postgresql-plr
BDEPENDS = [devel/gmake;databases/postgresql,-server;math/R]
DIST = [databases/postgresql-plr:REL8_3_0_18.tar.gz]
FULLPKGNAME = postgresql-plr-8.3.0.18
RDEPENDS = [math/R;databases/postgresql,-server]
(Junk lock obtained for amd64-2 at 1574065220.26)
>>> Running depends in databases/postgresql-plr at 1574065220.32
last junk was in x11/kde-applications/ark
/usr/sbin/pkg_add -aI -Drepair R-3.6.1 postgresql-server-12.1
was: /usr/sbin/pkg_add -aI -Drepair R-3.6.1 gmake-4.2.1p4 postgresql-server-12.1
/usr/sbin/pkg_add -aI -Drepair R-3.6.1 postgresql-server-12.1
The following new rcscripts were installed: /etc/rc.d/postgresql
See rcctl(8) for details.
New and changed readme(s):
/usr/local/share/doc/pkg-readmes/R
/usr/local/share/doc/pkg-readmes/postgresql-server
>>> Running show-prepare-results in databases/postgresql-plr at 1574065230.48
===> databases/postgresql-plr
===> postgresql-plr-8.3.0.18 depends on: postgresql-server-* ->
postgresql-server-12.1
===> postgresql-plr-8.3.0.18 depends on: gmake-* -> gmake-4.2.1p4
===> postgresql-plr-8.3.0.18 depends on: R-* -> R-3.6.1
===> Verifying specs: c lib/R/lib/R
===> found c.96.0 lib/R/lib/R.35.1
R-3.6.1
gmake-4.2.1p4
postgresql-server-12.1
(Junk lock released for amd64-2 at 1574065231.13)
distfiles size=263146
>>> Running build in databases/postgresql-plr at 1574065231.19
===> databases/postgresql-plr
===> Checking files for postgresql-plr-8.3.0.18
`/usr/ports/distfiles/REL8_3_0_18.tar.gz' is up to date.
>> (SHA256) REL8_3_0_18.tar.gz: OK
===> Extracting for postgresql-plr-8.3.0.18
===> Patching for postgresql-plr-8.3.0.18
===> Applying OpenBSD patch patch-Makefile
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$OpenBSD: patch-Makefile,v 1.1.1.1 2017/11/01 21:51:22 jeremy Exp $
|
|Add RPATH to the ELF header for libR, since it is installed in a location
|outside the default ld.so search path.
|
|Index: Makefile
|--- Makefile.orig
|+++ Makefile
--------------------------
Patching file Makefile using Plan A...
Hunk #1 succeeded at 21 with fuzz 2.
done
===> Compiler link: clang -> /usr/bin/clang
===> Compiler link: clang++ -> /usr/bin/clang++
===> Compiler link: cc -> /usr/bin/cc
===> Compiler link: c++ -> /usr/bin/c++
===> Generating configure for postgresql-plr-8.3.0.18
===> Configuring for postgresql-plr-8.3.0.18
===> Building for postgresql-plr-8.3.0.18
cc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement
-Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security
-fno-strict-aliasing -fwrapv -Wno-unused-command-line-argument -O2 -pipe -fPIC
-DPIC -I"./" -I"-I/usr/local/lib/R/include" -I/usr/local/lib/R/include -I. -I./
-I/usr/local/include/postgresql/server -I/usr/local/include/postgresql/internal
-I/usr/local/include -I/usr/local/include/libxml2 -I/usr/local/include
-DPKGLIBDIR=\"/usr/local/lib/postgresql\" -DDLSUFFIX=\".so\"
-DR_HOME_DEFAULT=\"/usr/local/lib/R\" -c -o plr.o plr.c
plr.c:759:65: error: no member named 'argnull' in 'struct
FunctionCallInfoBaseData'
PROTECT(rargs = plr_convertargs(function, fcinfo->arg, fcinfo->argnull,
fcinfo));
~~~~~~ ^
/usr/local/lib/R/include/Rinternals.h:852:31: note: expanded from macro
'PROTECT'
#define PROTECT(s) Rf_protect(s)
^
plr.c:759:52: error: no member named 'arg' in 'struct
FunctionCallInfoBaseData'; did you mean 'args'?
PROTECT(rargs = plr_convertargs(function, fcinfo->arg, fcinfo->argnull,
fcinfo));
^~~
args
/usr/local/lib/R/include/Rinternals.h:852:31: note: expanded from macro
'PROTECT'
#define PROTECT(s) Rf_protect(s)
^
/usr/local/include/postgresql/server/fmgr.h:95:16: note: 'args' declared here
NullableDatum args[FLEXIBLE_ARRAY_MEMBER];
^
2 errors generated.
gmake: *** [<builtin>: plr.o] Error 1
===> Exiting databases/postgresql-plr with an error
*** Error 2 in databases/postgresql-plr
(/usr/ports/infrastructure/mk/bsd.port.mk:2868
'/usr/obj/ports/postgresql-plr-8.3.0.18/.build_done')
*** Error 1 in databases/postgresql-plr
(/usr/ports/infrastructure/mk/bsd.port.mk:2534 'build')
*** Error 1 in /usr/ports (infrastructure/mk/bsd.port.subdir.mk:137 'build')
>>> Ended at 1574065232.27
Error: job failed with 256 on amd64-2 at 1574065232
>>> Building on amd64-3 under geo/pgpointcloud
BDEPENDS =
[devel/gmake;databases/postgresql,-server;devel/automake/1.15;devel/autoconf/2.69;devel/libtool;devel/cunit;textproc/libxml;devel/metaauto]
DIST =
[geo/pgpointcloud:pgpointcloud-patch1.patch;geo/pgpointcloud:pointcloud-1.2.0.tar.gz]
FULLPKGNAME = pointcloud-1.2.0p0
RDEPENDS = [textproc/libxml]
(Junk lock obtained for amd64-3 at 1574067825.02)
>>> Running depends in geo/pgpointcloud at 1574067825.08
last junk was in www/pecl-proctitle,php72
/usr/sbin/pkg_add -aI -Drepair autoconf-2.69p2 automake-1.15.1 cunit-2.1.2p2
libtool-2.4.2p0 libxml-2.9.10 metaauto-1.0p3 postgresql-server-12.1
was: /usr/sbin/pkg_add -aI -Drepair autoconf-2.69p2 automake-1.15.1
cunit-2.1.2p2 gmake-4.2.1p4 libtool-2.4.2p0 libxml-2.9.10 metaauto-1.0p3
postgresql-server-12.1
/usr/sbin/pkg_add -aI -Drepair autoconf-2.69p2 automake-1.15.1 cunit-2.1.2p2
libtool-2.4.2p0 libxml-2.9.10 metaauto-1.0p3 postgresql-server-12.1
The following new rcscripts were installed: /etc/rc.d/postgresql
See rcctl(8) for details.
New and changed readme(s):
/usr/local/share/doc/pkg-readmes/postgresql-server
>>> Running show-prepare-results in geo/pgpointcloud at 1574067830.53
===> geo/pgpointcloud
===> pointcloud-1.2.0p0 depends on: postgresql-server-* ->
postgresql-server-12.1
===> pointcloud-1.2.0p0 depends on: cunit-* -> cunit-2.1.2p2
===> pointcloud-1.2.0p0 depends on: metaauto-* -> metaauto-1.0p3
===> pointcloud-1.2.0p0 depends on: autoconf-2.69 -> autoconf-2.69p2
===> pointcloud-1.2.0p0 depends on: automake->=1.15,<1.16 -> automake-1.15.1
===> pointcloud-1.2.0p0 depends on: libtool-* -> libtool-2.4.2p0
===> pointcloud-1.2.0p0 depends on: gmake-* -> gmake-4.2.1p4
===> pointcloud-1.2.0p0 depends on: libxml-* -> libxml-2.9.10
===> Verifying specs: c iconv lzma m z xml2 c++ c++abi pthread
===> found c.96.0 iconv.7.0 lzma.2.1 m.10.1 z.5.0 xml2.16.1 c++.3.0 c++abi.1.0
pthread.26.1
autoconf-2.69p2
automake-1.15.1
cunit-2.1.2p2
gmake-4.2.1p4
libtool-2.4.2p0
libxml-2.9.10
metaauto-1.0p3
postgresql-server-12.1
(Junk lock released for amd64-3 at 1574067831.53)
distfiles size=312195
>>> Running extract in geo/pgpointcloud at 1574067831.59
===> geo/pgpointcloud
===> Checking files for pointcloud-1.2.0p0
`/usr/ports/distfiles/pointcloud-1.2.0.tar.gz' is up to date.
`/usr/ports/distfiles/pgpointcloud-patch1.patch' is up to date.
>> (SHA256) pointcloud-1.2.0.tar.gz: OK
>> (SHA256) pgpointcloud-patch1.patch: OK
===> Extracting for pointcloud-1.2.0p0
>>> Running patch in geo/pgpointcloud at 1574067831.92
===> geo/pgpointcloud
===> Patching for pointcloud-1.2.0p0
===> Applying distribution patches for pointcloud-1.2.0p0
===> Applying distribution patch pgpointcloud-patch1.patch
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|diff --git a/pgsql/pc_access.c b/pgsql/pc_access.c
|index 62599f2..3b29201 100644
|--- a/pgsql/pc_access.c
|+++ b/pgsql/pc_access.c
--------------------------
Patching file pgsql/pc_access.c using Plan A...
Hunk #1 succeeded at 879.
Hunk #2 succeeded at 939.
Hmm... The next patch looks like a unified diff to me...
The text leading up to this was:
--------------------------
|diff --git a/pgsql/pc_inout.c b/pgsql/pc_inout.c
|index 1378a80..05223f1 100644
|--- a/pgsql/pc_inout.c
|+++ b/pgsql/pc_inout.c
--------------------------
Patching file pgsql/pc_inout.c using Plan A...
Hunk #1 succeeded at 171.
done
===> Compiler link: clang -> /usr/bin/clang
===> Compiler link: clang++ -> /usr/bin/clang++
===> Compiler link: cc -> /usr/bin/cc
===> Compiler link: c++ -> /usr/bin/c++
>>> Running configure in geo/pgpointcloud at 1574067832.18
===> geo/pgpointcloud
===> Generating configure for pointcloud-1.2.0p0
Running autoreconf-2.69 in /usr/obj/ports/pointcloud-1.2.0/pointcloud-1.2.0
* Running /usr/local/bin/aclocal (1.15.1)
* Running /usr/local/bin/autoconf (2.69)
======================================
Now you are ready to run './configure'
======================================
===> Configuring for pointcloud-1.2.0p0
Using /usr/obj/ports/pointcloud-1.2.0/config.site (generated)
configure: WARNING: unrecognized options: --disable-silent-rules,
--disable-gtk-doc
configure: loading site script /usr/obj/ports/pointcloud-1.2.0/config.site
checking for gcc... cc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... (cached) o
checking whether we are using the GNU C compiler... (cached) yes
checking whether cc accepts -g... (cached) yes
checking for cc option to accept ISO C89... none needed
checking for cpp... /usr/bin/cpp
checking for git... no
checking for .git... no
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether c++ accepts -g... (cached) yes
checking how to run the C++ preprocessor... c++ -E
checking for grep that handles long lines and -e... (cached) /usr/bin/grep
checking for egrep... (cached) /usr/bin/egrep
checking for ANSI C header files... (cached) yes
checking for sys/types.h... (cached) yes
checking for sys/stat.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for memory.h... (cached) yes
checking for strings.h... (cached) yes
checking for inttypes.h... (cached) yes
checking for stdint.h... (cached) yes
checking for unistd.h... (cached) yes
checking for zlib.h... (cached) yes
checking for inflate in -lz... yes
checking CUnit/CUnit.h usability... yes
checking CUnit/CUnit.h presence... yes
checking for CUnit/CUnit.h... yes
checking for CU_initialize_registry in -lcunit... yes
checking for pg_config... /usr/local/bin/pg_config
checking PostgreSQL version... PostgreSQL 12.1
checking libpq-fe.h usability... yes
checking libpq-fe.h presence... yes
checking for libpq-fe.h... yes
checking for PQserverVersion in -lpq... yes
checking for xml2-config... /usr/local/bin/xml2-config
checking libxml/tree.h usability... yes
checking libxml/tree.h presence... yes
checking for libxml/tree.h... yes
checking libxml/parser.h usability... yes
checking libxml/parser.h presence... yes
checking for libxml/parser.h... yes
checking libxml/xpath.h usability... yes
checking libxml/xpath.h presence... yes
checking for libxml/xpath.h... yes
checking libxml/xpathInternals.h usability... yes
checking libxml/xpathInternals.h presence... yes
checking for libxml/xpathInternals.h... yes
checking for xmlInitParser in -lxml2... yes
checking las.hpp usability... no
checking las.hpp presence... no
checking for las.hpp... no
configure: creating ./config.status
config.status: creating config.mk
config.status: creating pgsql/Makefile
config.status: creating lib/pc_config.h
config.status: creating pgsql/sqldefines.h
PointCloud is now configured for
-------------- Compiler Info -------------
configure: WARNING: unrecognized options: --disable-silent-rules,
--disable-gtk-doc
C compiler: cc -O2 -pipe
SQL preprocessor: /usr/bin/cpp -traditional-cpp -w -P
-------------- Dependencies --------------
PostgreSQL config: /usr/local/bin/pg_config
PostgreSQL version: PostgreSQL 12.1 (121)
Libxml2 config: /usr/local/bin/xml2-config
Libxml2 version: 2.9.10
LazPerf status: disabled
CUnit status: /usr/local
>>> Running build in geo/pgpointcloud at 1574067837.04
===> geo/pgpointcloud
===> Building for pointcloud-1.2.0p0
gmake -C lib all
gmake[1]: Entering directory
'/usr/obj/ports/pointcloud-1.2.0/pointcloud-1.2.0/lib'
cc -O2 -pipe -fPIC -I/usr/local/include/libxml2 -I/usr/local/include -c -o
pc_bytes.o pc_bytes.c
cc -O2 -pipe -fPIC -I/usr/local/include/libxml2 -I/usr/local/include -c -o
pc_dimstats.o pc_dimstats.c
cc -O2 -pipe -fPIC -I/usr/local/include/libxml2 -I/usr/local/include -c -o
pc_filter.o pc_filter.c
cc -O2 -pipe -fPIC -I/usr/local/include/libxml2 -I/usr/local/include -c -o
pc_mem.o pc_mem.c
cc -O2 -pipe -fPIC -I/usr/local/include/libxml2 -I/usr/local/include -c -o
pc_patch.o pc_patch.c
cc -O2 -pipe -fPIC -I/usr/local/include/libxml2 -I/usr/local/include -c -o
pc_patch_dimensional.o pc_patch_dimensional.c
cc -O2 -pipe -fPIC -I/usr/local/include/libxml2 -I/usr/local/include -c -o
pc_patch_uncompressed.o pc_patch_uncompressed.c
cc -O2 -pipe -fPIC -I/usr/local/include/libxml2 -I/usr/local/include -c -o
pc_point.o pc_point.c
cc -O2 -pipe -fPIC -I/usr/local/include/libxml2 -I/usr/local/include -c -o
pc_pointlist.o pc_pointlist.c
cc -O2 -pipe -fPIC -I/usr/local/include/libxml2 -I/usr/local/include -c -o
pc_schema.o pc_schema.c
cc -O2 -pipe -fPIC -I/usr/local/include/libxml2 -I/usr/local/include -c -o
pc_sort.o pc_sort.c
cc -O2 -pipe -fPIC -I/usr/local/include/libxml2 -I/usr/local/include -c -o
pc_stats.o pc_stats.c
cc -O2 -pipe -fPIC -I/usr/local/include/libxml2 -I/usr/local/include -c -o
pc_util.o pc_util.c
cc -O2 -pipe -fPIC -I/usr/local/include/libxml2 -I/usr/local/include -c -o
pc_val.o pc_val.c
cc -O2 -pipe -fPIC -I/usr/local/include/libxml2 -I/usr/local/include -c -o
stringbuffer.o stringbuffer.c
cc -O2 -pipe -fPIC -I/usr/local/include/libxml2 -I/usr/local/include -c -o
hashtable.o hashtable.c
cc -O2 -pipe -fPIC -I/usr/local/include/libxml2 -I/usr/local/include -c -o
pc_patch_lazperf.o pc_patch_lazperf.c
ar rs libpc.a pc_bytes.o pc_dimstats.o pc_filter.o pc_mem.o pc_patch.o
pc_patch_dimensional.o pc_patch_uncompressed.o pc_point.o pc_pointlist.o
pc_schema.o pc_sort.o pc_stats.o pc_util.o pc_val.o stringbuffer.o hashtable.o
pc_patch_lazperf.o
ar: creating libpc.a
c++ -fPIC -std=c++0x -I/usr/local/include/libxml2 -I/usr/local/include -c -o
lazperf_adapter.o lazperf_adapter.cpp
ar rs liblazperf.a lazperf_adapter.o
ar: creating liblazperf.a
gmake -C cunit all
gmake[2]: Entering directory
'/usr/obj/ports/pointcloud-1.2.0/pointcloud-1.2.0/lib/cunit'
cc -O2 -pipe -I/usr/local/include/libxml2 -I/usr/local/include
-I/usr/local/include -I.. -c -o cu_tester.o cu_tester.c
cc -O2 -pipe -I/usr/local/include/libxml2 -I/usr/local/include
-I/usr/local/include -I.. -c -o cu_pc_bytes.o cu_pc_bytes.c
cc -O2 -pipe -I/usr/local/include/libxml2 -I/usr/local/include
-I/usr/local/include -I.. -c -o cu_pc_schema.o cu_pc_schema.c
cc -O2 -pipe -I/usr/local/include/libxml2 -I/usr/local/include
-I/usr/local/include -I.. -c -o cu_pc_point.o cu_pc_point.c
cc -O2 -pipe -I/usr/local/include/libxml2 -I/usr/local/include
-I/usr/local/include -I.. -c -o cu_pc_patch.o cu_pc_patch.c
cc -O2 -pipe -I/usr/local/include/libxml2 -I/usr/local/include
-I/usr/local/include -I.. -c -o cu_pc_patch_lazperf.o cu_pc_patch_lazperf.c
cc -O2 -pipe -I/usr/local/include/libxml2 -I/usr/local/include
-I/usr/local/include -I.. -c -o cu_pc_sort.o cu_pc_sort.c
cc -O2 -pipe -I/usr/local/include/libxml2 -I/usr/local/include
-I/usr/local/include -I.. -c -o cu_pc_util.o cu_pc_util.c
cc -o cu_tester cu_tester.o cu_pc_bytes.o cu_pc_schema.o cu_pc_point.o
cu_pc_patch.o cu_pc_patch_lazperf.o cu_pc_sort.o cu_pc_util.o ../libpc.a
../liblazperf.a -L/usr/local/lib -lxml2 -lz -L/usr/local/lib -llzma -lpthread
-L/usr/local/lib -liconv -lm -L/usr/local/lib -lcunit -lz -lm -lstdc++
gmake[2]: Leaving directory
'/usr/obj/ports/pointcloud-1.2.0/pointcloud-1.2.0/lib/cunit'
gmake[1]: Leaving directory
'/usr/obj/ports/pointcloud-1.2.0/pointcloud-1.2.0/lib'
gmake -C pgsql all
gmake[1]: Entering directory
'/usr/obj/ports/pointcloud-1.2.0/pointcloud-1.2.0/pgsql'
cc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement
-Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security
-fno-strict-aliasing -fwrapv -Wno-unused-command-line-argument -O2 -pipe -fPIC
-DPIC -I../lib -I. -I./ -I/usr/local/include/postgresql/server
-I/usr/local/include/postgresql/internal -I/usr/local/include
-I/usr/local/include/libxml2 -I/usr/local/include -c -o pc_inout.o pc_inout.c
In file included from pc_inout.c:12:
./pc_pgsql.h:81:46: error: unknown type name 'FunctionCallInfoData'
PCSCHEMA* pc_schema_from_pcid(uint32_t pcid, FunctionCallInfoData *fcinfo);
^
./pc_pgsql.h:93:66: error: unknown type name 'FunctionCallInfoData'
PCPOINT* pc_point_from_hexwkb(const char *hexwkb, size_t hexlen,
FunctionCallInfoData *fcinfo);
^
./pc_pgsql.h:111:66: error: unknown type name 'FunctionCallInfoData'
PCPATCH* pc_patch_from_hexwkb(const char *hexwkb, size_t hexlen,
FunctionCallInfoData *fcinfo);
^
3 errors generated.
gmake[1]: *** [<builtin>: pc_inout.o] Error 1
gmake[1]: Leaving directory
'/usr/obj/ports/pointcloud-1.2.0/pointcloud-1.2.0/pgsql'
gmake: *** [Makefile:4: all] Error 2
*** Error 2 in geo/pgpointcloud (/usr/ports/infrastructure/mk/bsd.port.mk:2868
'/usr/obj/ports/pointcloud-1.2.0/.build_done')
*** Error 1 in geo/pgpointcloud (/usr/ports/infrastructure/mk/bsd.port.mk:2534
'build')
===> Exiting geo/pgpointcloud with an error
*** Error 1 in /usr/ports (infrastructure/mk/bsd.port.subdir.mk:137 'build')
>>> Ended at 1574067841.29
Error: job failed with 256 on amd64-3 at 1574067841
