Dear Chrono-DEM Team,

I am trying to simulate a setup similar to the demo DEMdemo_Repose, but for 
particles that are much smaller in radius.

The original demo file ran normally to the end. However, when I tried to 
build my own setup with particles sizes that I need, the setup did NOT run. 
In fact, after so many trials that didn't work out to create a setup of my 
own, I finally decided to take the demo file and just use a scaling factor 
that can get me the particle sizes that I am looking for. However, I am 
still unable to get the simulation working for that range of particles 
sizes.

The particle sizes I am targeting is between 10 and 20 micrometers. 
However, since I am not able to simulate this size, I tried particles sizes 
in the range of 100 - 200 micrometer (Using a scale factor of 0.01 instead 
of the 2 that is in the original demo file). I made the necessary 
modification to get everything else properly scaled as well. However, the 
simulation takes an average of 8 - 12 minutes on 2 GPUs for every 0.1 
seconds of simulation time. The system has 8,850 particles only.

The following warning is shown for small particles range:

WARNING! A type of clump is instructed to have near-zero (or negative) mass 
or moment of inertia (mass: 2.0000003e-10, MOI magnitude: 3.080585e-18). 
This could destabilize the simulation.
Please make sure this is intentional.


WARNING! A type of clump is instructed to have near-zero (or negative) mass 
or moment of inertia (mass: 1.00000015e-10, MOI magnitude: 1.5402925e-18). 
This could destabilize the simulation.
Please make sure this is intentional.


WARNING! A type of clump is instructed to have near-zero (or negative) mass 
or moment of inertia (mass: 4.00000061e-10, MOI magnitude: 6.16117001e-18). 
This could destabilize the simulation.
Please make sure this is intentional.


WARNING! A type of clump is instructed to have near-zero (or negative) mass 
or moment of inertia (mass: 2.0000003e-10, MOI magnitude: 3.080585e-18). 
This could destabilize the simulation.
Please make sure this is intentional.


WARNING! A type of clump is instructed to have near-zero (or negative) mass 
or moment of inertia (mass: 2.0000003e-10, MOI magnitude: 3.080585e-18). 
This could destabilize the simulation.
Please make sure this is intentional.


WARNING! A type of clump is instructed to have near-zero (or negative) mass 
or moment of inertia (mass: 2.0000003e-10, MOI magnitude: 3.080585e-18). 
This could destabilize the simulation.
Please make sure this is intentional.

 

And finally, the following error is obtained:

-------- Simulation crashed "potentially" due to too many geometries in a 
bin --------
The dT reported max velocity is 0

------------------------------------
If the velocity is huge, then the simulation probably diverged due to 
encountering large particle velocities.
Decreasing the step size could help, and remember to check if your 
simulation objects are initially within the domain you specified.

------------------------------------
If the velocity is fair, and you are using a custom force model, one thing 
to do is to SetForceCalcThreadsPerBlock to a small number like 128 (see 
README.md troubleshooting for details).
If you are going to discuss this on forum 
https://groups.google.com/g/projectchrono, please include a visual 
rendering of the simulation before crash.

terminate called after throwing an instance of 'std::runtime_error'
  what():  GPU Assertion: unspecified launch failure. This happened in 
/home/4h1/src/DEM-Engine/src/algorithms/DEMCubContactDetection.cu:384


srun: error: mod-condo-g28: task 0: Aborted (core dumped)

 

Here below, I am providing the latest code I used for the range of 10 - 20 
micrometers in particle’s radius. Please let me know what the problem is 
here:

#include <core/ApiVersion.h>

#include <core/utils/ThreadManager.h>

#include <DEM/API.h>

#include <DEM/HostSideHelpers.hpp>

#include <DEM/utils/Samplers.hpp>

#include <cstdio>

#include <chrono>

#include <filesystem>

using namespace deme;

using namespace std::filesystem;

int main() {

    DEMSolver DEMSim;

    DEMSim.UseFrictionalHertzianModel();

    DEMSim.SetVerbosity(INFO);

    DEMSim.SetOutputFormat(OUTPUT_FORMAT::CSV);

    DEMSim.SetNoForceRecord();

    srand(42);

    float scaling = 0.001; 

    int num_template = 6;

    int min_sphere = 1;

    int max_sphere = 5;

    float min_rad = 0.01 * scaling;

    float max_rad = 0.02 * scaling;

    float min_relpos = -0.01 * scaling;

    float max_relpos = 0.01 * scaling;

    auto mat_type_walls = DEMSim.LoadMaterial({{"E", 1e8}, {"nu", 0.3}, 
{"CoR", 0.3}, {"mu", 1}});

    auto mat_type_particles = DEMSim.LoadMaterial({{"E", 1e9}, {"nu", 0.3}, 
{"CoR", 0.7}, {"mu", 1}});

    DEMSim.SetMaterialPropertyPair("CoR", mat_type_walls, 
mat_type_particles, 0.3);

auto funnel = 
DEMSim.AddWavefrontMeshObject(GetDEMEDataFile("mesh/funnel.obj"), 
mat_type_walls);

funnel->Scale(0.01); 

float funnel_bottom = 0.f;

std::vector<std::shared_ptr<DEMClumpTemplate>> clump_types;

for (int i = 0; i < num_template; i++) {

        int num_sphere = rand() % (max_sphere - min_sphere + 1) + 1;

        float mass = 0.1 * (float)num_sphere * std::pow(scaling, 3);

        float3 MOI = make_float3(2e-5 * (float)num_sphere, 1.5e-5 * 
(float)num_sphere, 1.8e-5 * (float)num_sphere) * 50. * std::pow(scaling, 5);

        std::vector<float> radii;

        std::vector<float3> relPos;

        float3 seed_pos = make_float3(0);

        for (int j = 0; j < num_sphere; j++) {

            radii.push_back(((float)rand() / RAND_MAX) * (max_rad - 
min_rad) + min_rad);

            float3 tmp;

            if (j == 0) {

                tmp.x = 0;

                tmp.y = 0;

                tmp.z = 0;

            } else {

                tmp.x = ((float)rand() / RAND_MAX) * (max_relpos - 
min_relpos) + min_relpos;

                tmp.y = ((float)rand() / RAND_MAX) * (max_relpos - 
min_relpos) + min_relpos;

                tmp.z = ((float)rand() / RAND_MAX) * (max_relpos - 
min_relpos) + min_relpos;

            }

            tmp += seed_pos;

            relPos.push_back(tmp);

            int choose_from = rand() % (j + 1);

            seed_pos = relPos.at(choose_from);

        }

 

        auto clump_ptr = DEMSim.LoadClumpType(mass, MOI, radii, relPos, 
mat_type_walls);

        clump_types.push_back(clump_ptr);

    }

    float spacing = 0.1 * scaling; //0.08 * scaling; 

    float fill_width = 0.01f; 

    float fill_height = 0.02f * fill_width; 

    float fill_bottom = funnel_bottom + fill_width + spacing;

    PDSampler sampler(spacing);

    std::vector<std::shared_ptr<DEMClumpTemplate>> input_pile_template_type;

    std::vector<float3> input_pile_xyz;

    float layer_z = 0;

    while (layer_z < fill_height)

    {

        float3 sample_center = make_float3(0, 0, fill_bottom + layer_z + 
spacing / 2);

        auto layer_xyz = sampler.SampleCylinderZ(sample_center, fill_width, 
0);

        unsigned int num_clumps = layer_xyz.size();

        for (unsigned int i = 0; i < num_clumps; i++) {

            input_pile_template_type.push_back(clump_types.at(i % 
num_template));

        }

        input_pile_xyz.insert(input_pile_xyz.end(), layer_xyz.begin(), 
layer_xyz.end());

        layer_z += spacing;

    }

    auto the_pile = DEMSim.AddClumps(input_pile_template_type, 
input_pile_xyz);

 

    DEMSim.InstructBoxDomainDimension({-10, 10}, {-10, 10}, {funnel_bottom 
- 1.f, funnel_bottom + 20.f}); 

    DEMSim.InstructBoxDomainBoundingBC("top_open", mat_type_walls);

    DEMSim.SetInitTimeStep(1e-7); 

    DEMSim.SetGravitationalAcceleration(make_float3(0, 0, -9.81));

    DEMSim.SetMaxVelocity(25.);

    DEMSim.SetErrorOutAvgContacts(10000); 

    DEMSim.SetForceCalcThreadsPerBlock(1); 

    DEMSim.Initialize();

    path out_dir = current_path();

    out_dir += "/DemoOutput_Repose";

    create_directory(out_dir);

 

    std::chrono::high_resolution_clock::time_point start = 
std::chrono::high_resolution_clock::now();

    for (int i = 0; i < 140; i++) {

        char filename[200], meshfile[200];

        sprintf(filename, "%s/DEMdemo_output_%04d.csv", out_dir.c_str(), i);

        sprintf(meshfile, "%s/DEMdemo_funnel_%04d.vtk", out_dir.c_str(), i);

        DEMSim.WriteSphereFile(std::string(filename));

        DEMSim.WriteMeshFile(std::string(meshfile));

        std::cout << "Frame: " << i << std::endl;

        DEMSim.DoDynamics(1e-1);

        DEMSim.ShowThreadCollaborationStats();

    }

std::chrono::high_resolution_clock::time_point end = 
std::chrono::high_resolution_clock::now();

std::chrono::duration<double> time_sec = 
std::chrono::duration_cast<std::chrono::duration<double>>(end - start);

std::cout << time_sec.count() << " seconds (wall time) to finish the 
simulation" << std::endl;

DEMSim.ShowTimingStats();

DEMSim.ClearTimingStats();

std::cout << "DEMdemo_Repose exiting..." << std::endl;

return 0;

}

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