Github user alanconway commented on the pull request:

    https://github.com/apache/qpid-proton/pull/68#issuecomment-188279273
  
    What Andrew said. Sphinx handles this properly, the source .rst files have 
links to other .rst files - works nicely for dispatch docs. The HTML generator 
converts local .rst links to .html in the generated html. We could modify our 
HTML generator to do the same. 
    
    Rant: This is a symptom of the fundamental problem with markdown: it was 
designed as a hack to generate HTML but touted as a generic markup language. So 
in practice markdown documents are riddled with HTML specific assumptions, like 
using .html in links, which break as soon as you try to use them in a new 
context. It's a pity because MD is so close to being a useful markup language 
that it consistently fools people. RST is much better but less popular, which 
means it's not really better since standard markup is only standard if it's 
widely used :(


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