Re: [HCLS-ACPP] Weekly Tcon today - 1:00-2:00pm

[Joanne Luciano]

Hi, Here's a short list of Evidence Code / Ontology Links/papers: 1. SRI/Peter Karp - the BioCyc family of pathway databases: Paper:   An Evidence Ontology for Use in Pathway/Genome Databases  Their site is apparently down now, but if you go to the site and look at the details of pathways (if I remember correctly) they use icons to indicate the evidence of a particular piece of data in a pathway. Here's the paper:  http://psb.stanford.edu/psb-online/proceedings/psb04/karp.pdf 2.  The Gene Ontology: http://www.geneontology.org/GO.evidence.shtml IC: Inferred by Curator IDA: Inferred from Direct Assay IEA: Inferred from Electronic Annotation IEP: Inferred from _expression_ Pattern IGI: Inferred from Genetic Interaction IMP: Inferred from Mutant Phenotype IPI: Inferred from Physical Interaction ISS: Inferred from Sequence or Structural Similarity NAS: Non-traceable Author Statement ND: No biological Data available RCA: inferred from Reviewed Computational Analysis TAS: Traceable Author Statement NR: Not Recorded 3.  Evidence Based Medicine (http://ebmg.wiley.com/sovellukset/ltk/ebmgfrontpage.html) Over 2 500 high-quality evidence summaries supporting the given recommendations – a specific feature of the guidelines is the use of evidence codes (graded from A where strong evidence exists and further research is unlikely to change the conclusion, to D where the evidence is weak and the estimate of effect is uncertain)· Joanne On Aug 1, 2006, at 12:07 PM, [EMAIL PROTECTED] wrote: ACPP Tcon on Tuesday, August 1 SW_HCLS(ACPP) SW Life Sciences IG Tuesdays 1:00pm-2:15pm/17:00-18:15 UTC Zakim Bridge +1.617.761.6200, conference 2277 ("ACPP") Agenda: - Review and Discussion: Representing Diabetes Guideline (Fibrate) using ontology and rules. Helen