I didn't mean to imply the time is not good in general. Doodle poll is a good idea.
Cheers, Joanne Sent from my iPhone On Apr 18, 2012, at 12:57 PM, Helena Deus <helenad...@gmail.com> wrote: > Eric also has problems with the time and he proposes pushing the telco to 1 > hour later, but that would mean Jun could not make it most of the time... > > I think 11 or 12 AM EDT is a good time for both EU and US participants > I've prepared a doodle poll - http://www.doodle.com/wtb7y5isbs3p25fk > > Some of the slots are overlapping with other w3c telcos but if most of the > would-be sysBio participants prefer another weekday, we can try to ask > Michel's permission to rearrange the calendars :) > > > Best, > Lena > > On Wed, Apr 18, 2012 at 5:46 PM, Joanne Luciano <jluci...@gmail.com> wrote: > +1 > > Or another time? > > I signed on, but couldn't stay had to catch a train (FYI - highly recommend > the train to/from Rensselaer / NY city. Beautiful ride along the east bank of > the Hudson river (2.5 hrs for planning purposes)) > > Sorry to miss you Katy! > > Also, in case any of you have not seem Katy's earlier work on classifying > phosphotases check it out. It is a beautiful straightforward example of > using defined classes in OWL and reasoners to do science. I have used that > example many times. > > Katy- were you able to get the wet lab experiment done to look for the > unclassified phosphate? > > Joanne > > Sent from my iPhone > > On Apr 18, 2012, at 10:58 AM, "M. Scott Marshall" <mscottmarsh...@gmail.com> > wrote: > >> Regrets. Any chance of a webex recording? >> >> Cheers, >> Scott >> >> On Apr 18, 2012 12:42 PM, "Helena Deus" <helenad...@gmail.com> wrote: >> Dear All, >> >> Please join me tomorrow at the Systems Biology Task force, where Katherine >> Wolstencroft will give us an overview of SEEK. >> >> PLEASE NOTE: Like last time, we will attempt to use webex for slide sharing, >> so I will share the webex link on IRC at 11AM EDT today. >> >> SEEK: An e-Laboratory for Systems Biology in Europe >> Franco B. Du Preez(1), Stuart Owen(2), Katherine Wolstencroft(2), Olga >> Krebs(3), Quyen Nguyen(3), Wolfgang Müller(3), Carole Goble(2) & Jacky L. >> Snoep(4) >> >> The SEEK is an open-source, web-based platform for the management and >> exchange of Systems Biology data, models and processes. It was originally >> developed in the SysMO-DB project (http://www.sysmodb.org) for the >> pan-European SysMO consortia (Systems Biology of Micro Organisms). However, >> it is now also being adopted by a large number of other consortia across >> Europe, for example, the Virtual Liver, EviMalar and Unicellsys. >> The SEEK is an e-Laboratory. In addition to providing a registry and >> repository of Systems Biology data, it provides facilities for model >> simulation, data exploration and is a gateway to other useful resources, >> such as JWS Online, BioModels and the BioPortal. Taverna workflows will also >> be available for discovering and running through SEEK, giving SEEK users >> access to a collection of complex Systems Biology analysis methods and data >> integration protocols (http://www.myexperiment.org/packs/47.html) >> Underlying the SEEK is the JERM (Just Enough Results Model), which is a >> minimum information model describing the relationships between SEEK assets. >> The JERM incorporates the ISA structure (Investigation, Study, Assay) to >> associate data with the assays that generated them, and to allow the >> aggregation of assays into wider studies and investigations. JERM data >> compliance is managed by the distribution of JERM spreadsheet templates, >> which can be semantically enabled with RightField, a tool that embeds >> collections of ontology terms into specific spreadsheet cells. Ongoing work >> is exploring extracting, storing and querying collected data and metadata in >> RDF. >> 1.Manchester Interdisciplinary Biocentre, University of Manchester, UK >> 2.School of Computer Science, University of Manchester, UK >> 3.Heidelberg Institute for Theoretical Studies (Hits), gGmbH, Germany >> 4.Department of Biochemistry, Stellenbosch University, South Africa >> >> Katy Wolstencroft >> I am a Research Fellow at the University of Manchester and a visiting >> researcher at the Vrije Universiteit in Amsterdam. I am a member of the >> SysMO-DB project and the myGrid consortium. My background is in >> bioinformatics and my work focuses on data integration, semantic data >> integration and scientific workflows. >> Stuart Owen is a Software Architect at the University of Manchester. He is a >> member of the SysMO-DB project and the myGrid consortium. He has a long >> background in Software Engineering, with a particular focus on Knowledge >> Management. >> >> Conference Details >> Systems Biology >> http://www.w3.org/wiki/HCLSIG/SysBio >> >> Date of Call: Wednesday April 18 2012 >> Time of Call: 11:00am - 12:00pm EDT >> Dial-In #: +1.617.761.6200 (Cambridge, MA) >> Dial-In #: +33.4.26.46.79.03 (Paris, France) >> Dial-In #: +44.203.318.0479 (London, UK) >> Participant Access Code: 4257 ("HCLS") >> IRC Channel: irc.w3.org port 6665 channel #HCLS (see >> [http://www.w3.org/Project/IRC/ W3C IRC page] for details, or see >> [http://cgi.w3.org/member-bin/irc/irc.cgi Web IRC]) >> Mibbit quick start: Click on >> [http://www.mibbit.com/chat/?server=irc.w3.org:6665&channel=%23hcls mibbit] >> for instant IRC access >> Duration: 1h >> Convener: Helena F Deus >> >> Agenda >> * Katy's talk >> * Ideas about next invited speakers >> * Volunteers to start looking at systems biology models >> >> >> >> -- >> Helena F. Deus >> Post-Doctoral Researcher at DERI/NUIG >> http://lenadeus.info/ > > > > -- > Helena F. Deus > Post-Doctoral Researcher at DERI/NUIG > http://lenadeus.info/ >
