Attached are the files that we use. Becky
On Thu, Apr 5, 2012 at 6:13 PM, Becky Ligon <[email protected]> wrote: > Sure. No problem. > > Becky > > > On Thu, Apr 5, 2012 at 5:53 PM, Jim Kusznir <[email protected]> wrote: > >> Can you also provide the pvfs2.[c]sh files you use? I'm kinda short >> on time, and I was unable to rebuild the RPM the way my previous RPM >> built (installing into the main filesystem), so I'm hesitant to try >> and develop it now. >> >> --Jim >> >> On Tue, Apr 3, 2012 at 2:06 PM, Becky Ligon <[email protected]> wrote: >> > Jim: >> > >> > We use the info in profile.d to make sure our environments have the >> correct >> > areas to look for libraries. I've attached copies of those files, so >> you >> > can see what we setup. You can choose to use them or not. However, >> when >> > you compile PVFS, you need to make sure it can find the appropriate >> > libraries and include directory for BDB. >> > >> > I don't know if that DropBox file service is home grown or is a 3rd >> party >> > software. I can find out. >> > >> > Becky >> > >> > >> > On Tue, Apr 3, 2012 at 4:31 PM, Jim Kusznir <[email protected]> wrote: >> >> >> >> Thanks for the spec file, its building pretty well. >> >> >> >> Is there anything special in your profile.d/db.[c]sh files? >> >> >> >> Also, I'm really curious about the webapp that creates the webdrop >> >> service..Is that a customized open source package, or something >> >> in-house? >> >> >> >> Thanks! >> >> --Jim >> >> >> >> >> >> On Mon, Apr 2, 2012 at 11:19 AM, Becky Ligon <[email protected]> >> wrote: >> >> > Jim: >> >> > >> >> > We downloaded the software from the Oracle site and created an rpm >> from >> >> > that. We are running Centos5 on our productions servers with >> >> > kernel=2.6.18-238.9.1.el5 and have been running a version of db4 for >> at >> >> > least the past 3 years. So, you should be able to create the rpm. I >> >> > can >> >> > send you the rpm that we are using but it is taylored to our >> >> > environment; we >> >> > install db4 in /opt/db4, because other items depend on the installed >> >> > version. >> >> > >> >> > Becky >> >> > >> >> > >> >> > On Mon, Apr 2, 2012 at 1:37 PM, Jim Kusznir <[email protected]> >> wrote: >> >> >> >> >> >> I've been trying to build a db4 rpm on my centos box, but it appears >> >> >> it has dependencies that require an OS upgrade...how did you get >> >> >> anything newer than the stock db4 installed on centos5? >> >> >> >> >> >> --Jim >> >> >> >> >> >> On Sat, Mar 31, 2012 at 3:07 PM, Becky Ligon <[email protected]> >> >> >> wrote: >> >> >> > Jim: >> >> >> > >> >> >> > I understand your situation. Here at Clemson University, we went >> >> >> > through >> >> >> > the same situation a couple of years ago. Now, we backup the >> >> >> > metadata >> >> >> > databases. We don't have the space to backup our data either! >> >> >> > >> >> >> > Under no circumstances should you run pvfs2-fsck. If you do, >> then we >> >> >> > won't >> >> >> > be able to help at all, if you run this command in the destructive >> >> >> > mode. >> >> >> > If >> >> >> > you're willing, Omnibond MAY be able to write some utilities that >> we >> >> >> > help >> >> >> > you recover most of the data. You will have to speak to Boyd >> Wilson >> >> >> > ([email protected]) and workout something. >> >> >> > >> >> >> > Becky Ligon >> >> >> > >> >> >> > >> >> >> > On Fri, Mar 30, 2012 at 5:55 PM, Jim Kusznir <[email protected]> >> >> >> > wrote: >> >> >> >> >> >> >> >> I made no changes to my environment; it was up and running just >> >> >> >> fine. >> >> >> >> I ran db_recover, and it immediately returned, with no apparent >> sign >> >> >> >> of doing anything but creating a log.000000001 file. >> >> >> >> >> >> >> >> I have the centos DB installed, db4-4.3.29-10.el5 >> >> >> >> >> >> >> >> I have no backups; this is my high performance filesystem of >> 99TB; >> >> >> >> it >> >> >> >> is the largest disk we have and therefore have no means of >> backing >> >> >> >> it >> >> >> >> up. We don't have anything big enough to hold that much data. >> >> >> >> >> >> >> >> Is there any hope? Can we just identify and delete the files >> that >> >> >> >> have the db dammange on it? (Note that I don't even have >> anywhere >> >> >> >> to >> >> >> >> back up this data to temporally if we do get it running, so I'd >> need >> >> >> >> to "fix in place". >> >> >> >> >> >> >> >> thanks! >> >> >> >> --Jim >> >> >> >> >> >> >> >> --Jim >> >> >> >> >> >> >> >> On Fri, Mar 30, 2012 at 2:44 PM, Becky Ligon <[email protected] >> > >> >> >> >> wrote: >> >> >> >> > Jim: >> >> >> >> > >> >> >> >> > If you haven't made any recent changes to your pvfs >> environment or >> >> >> >> > Berkeley >> >> >> >> > Db installation, then it looks like you have a corrupted >> metadata >> >> >> >> > database. >> >> >> >> > There is no way to easily recover. Sometimes, the Berkeley db >> >> >> >> > command >> >> >> >> > "db_recover" might work, but PVFS doesn't have transactions >> turned >> >> >> >> > on, >> >> >> >> > so >> >> >> >> > normally it doesn't work. It's worth a try, just to be sure. >> >> >> >> > >> >> >> >> > Do you have any recent backups of the databases? If so, then >> you >> >> >> >> > will >> >> >> >> > need >> >> >> >> > to use a set of backups that were created around the same >> time, so >> >> >> >> > the >> >> >> >> > databases will be somewhat consistent with each other. >> >> >> >> > >> >> >> >> > Which version of Berkeley are you using? We have had >> corruption >> >> >> >> > issues >> >> >> >> > with >> >> >> >> > older versions of it. We strongly recommend 4.8 or higher. >> There >> >> >> >> > are >> >> >> >> > some >> >> >> >> > know problems with threads in the older versions . >> >> >> >> > >> >> >> >> > Becky Ligon >> >> >> >> > >> >> >> >> > On Fri, Mar 30, 2012 at 3:28 PM, Jim Kusznir < >> [email protected]> >> >> >> >> > wrote: >> >> >> >> >> >> >> >> >> >> Hi all: >> >> >> >> >> >> >> >> >> >> I got some notices from my users with "wierdness with pvfs2" >> this >> >> >> >> >> morning, and went and investagated. eventually, I found the >> >> >> >> >> following >> >> >> >> >> on one of my 3 serers: >> >> >> >> >> >> >> >> >> >> [S 03/30 12:22] PVFS2 Server on node pvfs2-io-0-2 version >> 2.8.2 >> >> >> >> >> starting... >> >> >> >> >> [E 03/30 12:23] Warning: got invalid handle or key size in >> >> >> >> >> dbpf_dspace_iterate_handles(). >> >> >> >> >> [E 03/30 12:23] Warning: skipping entry. >> >> >> >> >> [E 03/30 12:23] c_get failed on iteration 3044 >> >> >> >> >> [E 03/30 12:23] dbpf_dspace_iterate_handles_op_svc: Invalid >> >> >> >> >> argument >> >> >> >> >> [E 03/30 12:23] Error adding handle range >> >> >> >> >> 1431655768-2147483649,3579139414-4294967295 to filesystem >> >> >> >> >> pvfs2-fs >> >> >> >> >> [E 03/30 12:23] Error: Could not initialize server interfaces; >> >> >> >> >> aborting. >> >> >> >> >> [E 03/30 12:23] Error: Could not initialize server; aborting. >> >> >> >> >> >> >> >> >> >> ------------ >> >> >> >> >> pvfs2-fs.conf: >> >> >> >> >> ----------- >> >> >> >> >> >> >> >> >> >> <Defaults> >> >> >> >> >> UnexpectedRequests 50 >> >> >> >> >> EventLogging none >> >> >> >> >> LogStamp datetime >> >> >> >> >> BMIModules bmi_tcp >> >> >> >> >> FlowModules flowproto_multiqueue >> >> >> >> >> PerfUpdateInterval 1000 >> >> >> >> >> ServerJobBMITimeoutSecs 30 >> >> >> >> >> ServerJobFlowTimeoutSecs 30 >> >> >> >> >> ClientJobBMITimeoutSecs 300 >> >> >> >> >> ClientJobFlowTimeoutSecs 300 >> >> >> >> >> ClientRetryLimit 5 >> >> >> >> >> ClientRetryDelayMilliSecs 2000 >> >> >> >> >> StorageSpace /mnt/pvfs2 >> >> >> >> >> LogFile /var/log/pvfs2-server.log >> >> >> >> >> </Defaults> >> >> >> >> >> >> >> >> >> >> <Aliases> >> >> >> >> >> Alias pvfs2-io-0-0 tcp://pvfs2-io-0-0:3334 >> >> >> >> >> Alias pvfs2-io-0-1 tcp://pvfs2-io-0-1:3334 >> >> >> >> >> Alias pvfs2-io-0-2 tcp://pvfs2-io-0-2:3334 >> >> >> >> >> </Aliases> >> >> >> >> >> >> >> >> >> >> <Filesystem> >> >> >> >> >> Name pvfs2-fs >> >> >> >> >> ID 62659950 >> >> >> >> >> RootHandle 1048576 >> >> >> >> >> <MetaHandleRanges> >> >> >> >> >> Range pvfs2-io-0-0 4-715827885 >> >> >> >> >> Range pvfs2-io-0-1 715827886-1431655767 >> >> >> >> >> Range pvfs2-io-0-2 1431655768-2147483649 >> >> >> >> >> </MetaHandleRanges> >> >> >> >> >> <DataHandleRanges> >> >> >> >> >> Range pvfs2-io-0-0 2147483650-2863311531 >> >> >> >> >> Range pvfs2-io-0-1 2863311532-3579139413 >> >> >> >> >> Range pvfs2-io-0-2 3579139414-4294967295 >> >> >> >> >> </DataHandleRanges> >> >> >> >> >> <StorageHints> >> >> >> >> >> TroveSyncMeta yes >> >> >> >> >> TroveSyncData no >> >> >> >> >> </StorageHints> >> >> >> >> >> </Filesystem> >> >> >> >> >> ------------- >> >> >> >> >> Any suggestions for recovery? >> >> >> >> >> >> >> >> >> >> Thanks! >> >> >> >> >> --Jim >> >> >> >> >> _______________________________________________ >> >> >> >> >> Pvfs2-users mailing list >> >> >> >> >> [email protected] >> >> >> >> >> >> http://www.beowulf-underground.org/mailman/listinfo/pvfs2-users >> >> >> >> > >> >> >> >> > >> >> >> >> > >> >> >> >> > >> >> >> >> > -- >> >> >> >> > Becky Ligon >> >> >> >> > OrangeFS Support and Development >> >> >> >> > Omnibond Systems >> >> >> >> > Anderson, South Carolina >> >> >> >> > >> >> >> >> > >> >> >> > >> >> >> > >> >> >> > >> >> >> > >> >> >> > -- >> >> >> > Becky Ligon >> >> >> > OrangeFS Support and Development >> >> >> > Omnibond Systems >> >> >> > Anderson, South Carolina >> >> >> > >> >> >> > >> >> > >> >> > >> >> > >> >> > >> >> > -- >> >> > Becky Ligon >> >> > OrangeFS Support and Development >> >> > Omnibond Systems >> >> > Anderson, South Carolina >> >> > >> >> > >> > >> > >> > >> > >> > -- >> > Becky Ligon >> > OrangeFS Support and Development >> > Omnibond Systems >> > Anderson, South Carolina >> > >> > >> > > > > -- > Becky Ligon > OrangeFS Support and Development > Omnibond Systems > Anderson, South Carolina > > > -- Becky Ligon OrangeFS Support and Development Omnibond Systems Anderson, South Carolina
pvfs.csh
Description: C-Shell script
pvfs.sh
Description: Bourne shell script
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