Hello everyone,
first, thank you very much for writing a python wrapper to the GSL. It is
greatly appreciated, and I look forward to using it.
After extensive googling, I managed to compile the GSL libraries on windows
using Visual Studio 2010 with Brad Chapman's excellent guide.
The library resides in:
C:\Program Files (x86)\gsl-1.14
and the directory structure looks like this: (apologies about the spam)
C:\Program Files (x86)\gsl-1.14>tree
Folder PATH listing for volume OS
Volume serial number is CA49-670D
C:.
+---blas
+---block
+---bspline
+---build.vc10
¦ +---cblasdll
¦ ¦ +---Debug
¦ ¦ +---Win32
¦ ¦ +---Debug
¦ +---cblaslib
¦ ¦ +---Win32
¦ ¦ +---Debug
¦ +---Debug
¦ +---dll
¦ ¦ +---Win32
¦ ¦ +---Debug
¦ +---dlltest
¦ ¦ +---runtests
¦ ¦ +---testblock
¦ ¦ ¦ +---dll
¦ ¦ ¦ ¦ +---Win32
¦ ¦ ¦ ¦ +---Debug
¦ ¦ ¦ +---ipch
¦ ¦ ¦ ¦ +---testblock-96317742
¦ ¦ ¦ +---Win32
¦ ¦ ¦ +---Debug
¦ ¦ +---testbspline
¦ ¦ +---testcblas
¦ ¦ +---testcdf
¦ ¦ +---testcheb
¦ ¦ +---testcombination
¦ ¦ ¦ +---dll
¦ ¦ ¦ ¦ +---Win32
¦ ¦ ¦ ¦ +---Debug
¦ ¦ ¦ +---Win32
¦ ¦ ¦ +---Debug
¦ ¦ +---testcomplex
¦ ¦ +---testconst
¦ ¦ +---testderiv
¦ ¦ +---testdht
¦ ¦ +---testdiff
¦ ¦ +---testeigen
¦ ¦ +---testerr
¦ ¦ +---testfft
¦ ¦ +---testfit
¦ ¦ +---testhistogram
¦ ¦ +---testieee
¦ ¦ +---testintegration
¦ ¦ +---testinterpolation
¦ ¦ +---testlinalg
¦ ¦ +---testmatrix
¦ ¦ +---testmin
¦ ¦ +---testmonte
¦ ¦ +---testmultifit
¦ ¦ +---testmultimin
¦ ¦ +---testmultiroots
¦ ¦ +---testmultiset
¦ ¦ +---testntuple
¦ ¦ +---testode
¦ ¦ +---testpermutation
¦ ¦ +---testpoly
¦ ¦ +---testqrng
¦ ¦ +---testrandist
¦ ¦ +---testrng
¦ ¦ +---testroots
¦ ¦ +---testsiman
¦ ¦ +---testsort
¦ ¦ +---testspecfunc
¦ ¦ +---teststatistics
¦ ¦ +---testsum
¦ ¦ +---testsys
¦ ¦ +---testvector
¦ ¦ +---testwavelet
¦ +---gsldefs
¦ ¦ +---Debug
¦ +---gsldll
¦ ¦ +---Win32
¦ ¦ +---Debug
¦ ¦ +---blas
¦ ¦ +---block
¦ ¦ +---bspline
¦ ¦ +---cdf
¦ ¦ +---cheb
¦ ¦ +---combination
¦ ¦ +---complex
¦ ¦ +---deriv
¦ ¦ +---dht
¦ ¦ +---diff
¦ ¦ +---eigen
¦ ¦ +---err
¦ ¦ +---fft
¦ ¦ +---fit
¦ ¦ +---gsl
¦ ¦ +---histogram
¦ ¦ +---ieeeutils
¦ ¦ +---integration
¦ ¦ +---interpolation
¦ ¦ +---linalg
¦ ¦ +---matrix
¦ ¦ +---min
¦ ¦ +---monte
¦ ¦ +---multifit
¦ ¦ +---multimin
¦ ¦ +---multiroot
¦ ¦ +---multiset
¦ ¦ +---ntuple
¦ ¦ +---ode
¦ ¦ +---permutation
¦ ¦ +---poly
¦ ¦ +---qrng
¦ ¦ +---randist
¦ ¦ +---rng
¦ ¦ +---roots
¦ ¦ +---siman
¦ ¦ +---sort
¦ ¦ +---specfunc
¦ ¦ +---statistics
¦ ¦ +---sum
¦ ¦ +---sys
¦ ¦ +---test
¦ ¦ +---utils
¦ ¦ +---vector
¦ ¦ +---wavelet
¦ +---gslhdrs
¦ ¦ +---Win32
¦ ¦ +---Debug
¦ +---gsllib
¦ ¦ +---Win32
¦ ¦ +---Debug
¦ ¦ +---blas
¦ ¦ +---block
¦ ¦ +---bspline
¦ ¦ +---cdf
¦ ¦ +---cheb
¦ ¦ +---combination
¦ ¦ +---complex
¦ ¦ +---deriv
¦ ¦ +---dht
¦ ¦ +---diff
¦ ¦ +---eigen
¦ ¦ +---err
¦ ¦ +---fft
¦ ¦ +---fit
¦ ¦ +---gsl
¦ ¦ +---histogram
¦ ¦ +---ieeeutils
¦ ¦ +---integration
¦ ¦ +---interpolation
¦ ¦ +---linalg
¦ ¦ +---matrix
¦ ¦ +---min
¦ ¦ +---monte
¦ ¦ +---multifit
¦ ¦ +---multimin
¦ ¦ +---multiroot
¦ ¦ +---multiset
¦ ¦ +---ntuple
¦ ¦ +---ode
¦ ¦ +---permutation
¦ ¦ +---poly
¦ ¦ +---qrng
¦ ¦ +---randist
¦ ¦ +---rng
¦ ¦ +---roots
¦ ¦ +---siman
¦ ¦ +---sort
¦ ¦ +---specfunc
¦ ¦ +---statistics
¦ ¦ +---sum
¦ ¦ +---sys
¦ ¦ +---test
¦ ¦ +---utils
¦ ¦ +---vector
¦ ¦ +---wavelet
¦ +---lib
¦ ¦ +---Win32
¦ ¦ +---Debug
¦ +---libtest
¦ +---runtests
¦ +---testblock
¦ ¦ +---ipch
¦ ¦ ¦ +---testblock-333944dd
¦ ¦ +---Win32
¦ ¦ +---Debug
¦ +---testbspline
¦ +---testcblas
¦ +---testcdf
¦ +---testcheb
¦ +---testcombination
¦ +---testcomplex
¦ +---testconst
¦ +---testderiv
¦ +---testdht
¦ +---testdiff
¦ +---testeigen
¦ +---testerr
¦ +---testfft
¦ +---testfit
¦ +---testhistogram
¦ +---testieee
¦ +---testintegration
¦ +---testinterpolation
¦ +---testlinalg
¦ +---testmatrix
¦ +---testmin
¦ +---testmonte
¦ +---testmultifit
¦ +---testmultimin
¦ +---testmultiroots
¦ +---testmultiset
¦ +---testntuple
¦ +---testode
¦ +---testpermutation
¦ +---testpoly
¦ +---testqrng
¦ +---testrandist
¦ +---testrng
¦ +---testroots
¦ +---testsiman
¦ +---testsort
¦ +---testspecfunc
¦ +---teststatistics
¦ +---testsum
¦ +---testsys
¦ +---testvector
¦ +---testwavelet
+---cblas
+---cdf
+---cheb
+---combination
+---complex
+---const
+---deriv
+---dht
+---diff
+---doc
¦ +---examples
+---eigen
+---err
+---fft
+---fit
+---gsl
+---histogram
+---ieee-utils
+---integration
+---interpolation
+---linalg
+---matrix
+---min
+---monte
+---multifit
+---multimin
+---multiroots
+---multiset
+---ntuple
+---ode-initval
+---permutation
+---poly
+---qrng
+---randist
+---rng
+---roots
+---siman
+---sort
+---specfunc
+---statistics
+---sum
+---sys
+---test
+---utils
+---vector
+---wavelet
The actual compiled directory files are here:
C:\Program Files (x86)\gsl-1.14\build.vc10\lib\Win32\Debug>dir
Volume in drive C is OS
Volume Serial Number is CA49-670D
Directory of C:\Program Files (x86)\gsl-1.14\build.vc10\lib\Win32\Debug
06/02/2011 17:10 <DIR> .
06/02/2011 17:10 <DIR> ..
06/02/2011 17:10 1,113,268 cblas.lib
06/02/2011 17:10 61,440 cblas.pdb
06/02/2011 17:10 17,849,866 gsl.lib
06/02/2011 17:10 266,240 gsl.pdb
4 File(s) 19,290,814 bytes
2 Dir(s) 172,105,408,512 bytes free
Now - how do I set up the gsl_site.py file?
My best guess, was something like this:
# Some systems do not provide gsl-config. So here the locations can be
entered
# by hand.
import os
# The path to the directory where gsl is installed. Currently setup.py
assumes
# that the include files are located in "prefix/include".
prefix = os.path.join("C:\\", "Program Files (x86)", "gsl-1.14")
cflags = "-g -I" + os.path.join(prefix, "include")
libs = "-L" + os.path.join(prefix, "build.vc10","lib","Win32","Debug")+ "
-lgsl -lgslcblas -lm"
# Enter the correct GSL versions by hand..
version = "1.14"
# swig_extension.py needs swig to generate the approbriate wrapper files.
This
# variable only needs to be correct is you use USE_SWIG=1 in setup.py
swig = os.path.join("F:\\", "Program Files", "swigwin-2.0.2")
#swig = os.path.join("C:\\", "Programs", "Swig", "SWIG-1.3.19", "swig")
but the cflags option is obviously wrong.
Running:
C:\TEMP\pygsl-0.9.5>python setup.py build
numpy
Building testing ufuncs!
running build
running build_py
copying pygsl\_mlab.py -> build\lib.win32-2.7\pygsl
copying pygsl\_numobj.py -> build\lib.win32-2.7\pygsl
copying gsl_dist\array_includes.py -> build\lib.win32-2.7\pygsl\gsl_dist
copying gsl_dist\gsl_site.py -> build\lib.win32-2.7\pygsl\gsl_dist
running build_ext
No module named msvccompiler in numpy.distutils; trying from distutils
building 'errno' extension
C:\Program Files (x86)\Microsoft Visual Studio 9.0\VC\BIN\cl.exe /c /nologo
/Ox
/MD /W3 /GS- /DNDEBUG -DSWIG_COBJECT_TYPES=1 -DGSL_RANGE_CHECK=1 -DDEBUG=1
-DNUM
ERIC=0 -DPYGSL_GSL_MAJOR_VERSION=1 -DPYGSL_GSL_MINOR_VERSION=14 -UNDEBUG
-I"C:\P
rogram Files (x86)\gsl-1.14\include" -IInclude -I.
-IC:\Python27\lib\site-packag
es\numpy\core\include -IC:\Python27\include -IC:\Python27\PC
/Tcsrc/init/errorno
.c /Fobuild\temp.win32-2.7\Release\src/init/errorno.obj
Found executable C:\Program Files (x86)\Microsoft Visual Studio
9.0\VC\BIN\cl.ex
e
cl : Command line warning D9025 : overriding '/DNDEBUG' with '/UNDEBUG'
errorno.c
src/init/errorno.c(6) : fatal error C1083: Cannot open include file:
'gsl/gsl_er
rno.h': No such file or directory
error: Command "C:\Program Files (x86)\Microsoft Visual Studio
9.0\VC\BIN\cl.exe
/c /nologo /Ox /MD /W3 /GS- /DNDEBUG -DSWIG_COBJECT_TYPES=1
-DGSL_RANGE_CHECK=1
-DDEBUG=1 -DNUMERIC=0 -DPYGSL_GSL_MAJOR_VERSION=1
-DPYGSL_GSL_MINOR_VERSION=14
-UNDEBUG -I"C:\Program Files (x86)\gsl-1.14\include" -IInclude -I.
-IC:\Python27
\lib\site-packages\numpy\core\include -IC:\Python27\include -IC:\Python27\PC
/Tc
src/init/errorno.c /Fobuild\temp.win32-2.7\Release\src/init/errorno.obj"
failed
with exit status 2
which obviously means the compilation fails to find gsl_erno.h
I cannot figure a sensible way to configure the compiler flags. For the
record:
- I am using Visual Studio 2008 to compile.
- I tried using minGW32 to compile, it doesn't make a difference, I don't
think that's the case.
gsl_errno.h is in:
C:\Program Files (x86)\gsl-1.14\gsl
Thank you very much!
Federico
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