Also using the cookie-cutter SQLAlchemy in front of Gunicorn.

1) I have autoflush disabled.  It doesn’t reduce the mental load—as your 
example shows, you still need to understand when and why to use flush—and 
premature flushes are a headache to work around.

2) After a query fails (in this case a deadlock), the session is unusable for 
the remainder of the request.  This is expected behavior.  Usually when I’ve 
encountered an exception like this, it’s because either my exception view or a 
tween somewhere is trying to run a query.  I’m not sure how to overcome this 
limitation, but I’ve haven’t found it too bad to work around.

— Theron



> On Jun 21, 2019, at 10:39 AM, Jens Troeger <jens.troe...@gmail.com> wrote:
> 
> Hello,
> 
> I’m using gunicorn <https://gunicorn.org/> in front of a Pyramid server, and 
> I changed the configuration from 1 to 4 workers. Now I occasionally see the 
> following exception:
> 
> InvalidRequestError: This Session's transaction has been rolled back due to a 
> previous exception during flush. To begin a new transaction with this 
> Session, first issue Session.rollback(). Original exception was: (raised as a 
> result of Query-invoked autoflush; consider using a session.no_autoflush 
> block if this flush is occurring prematurely)
> (pymysql.err.OperationalError) (1213, 'Deadlock found when trying to get 
> lock; try restarting transaction')
> [SQL: UPDATE … SET foo=%(bar)s WHERE …]
> [parameters: {…}]
> (Background on this error at: http://sqlalche.me/e/e3q8)
> 
> The server follows the SQLA cookie-cutter template 
> <https://github.com/pylons/pyramid-cookiecutter-starter>, and is running with 
> a SQLAlchemy Session factory 
> <https://docs.sqlalchemy.org/en/13/orm/session_api.html#session-and-sessionmaker>
>  whose autoflush 
> <https://docs.sqlalchemy.org/en/latest/orm/session_api.html#sqlalchemy.orm.session.Session.params.autoflush>
>  still defaults to true. Curiously, it seems that only one particular 
> endpoint keeps triggering this problem, and the failing UPDATE attempts to 
> flip a boolean flag.
> 
> However, the exception gives rise to two questions:
> SQLAlchemy perspective. The reason for using autoflush here is to ensure that 
> new ORM objects whose primary key is generated like so:
>     id = Column(UUID(), default=uuid.uuid4, primary_key=True)
> have a valid id after they’ve been newly created. Would using a manual 
> dbsession.flush() be preferable with autoflush disabled? Are there better 
> recommended ways of handling this problem? (See this related question 
> <https://groups.google.com/forum/#!topic/sqlalchemy-alembic/Nzz5gTyrptE>.)
> Pyramid perspective. Every Request object has its own Session object 
> associated which commits when request handling is done. However, the above 
> exception in a sense fails the request handling. If I was to follow the 
> suggestion to “begin a new transaction with this Session” then how would I do 
> that? Does Pyramid provide existing support to handle such issues, or does 
> the exception indicate a problem elsewhere that requires attention? What is 
> best practice here?
> In general, I think I’d like to understand the finer details of SQLAlchemy’s 
> autoflush and how that interplays with Pyramid’s requests and their Sessions 
> and transactions. I wonder, for example, if the above indicates that a client 
> has sent the same request more than once (Android’s httplib seems to do 
> that), and with more than one workers enabled this manifests a race condition.
> 
> Much thanks!
> Jens
> 
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