Tsjerk,
Not currently. The closest you can achieve is to write out the
PDB file, delete the object, and then read it back in.
- Warren
--
mailto:war...@delanoscientific.com
Warren L. DeLano, Ph.D.
Principal Scientist
DeLano Scientific LLC
Voice (650)-346-1154
Fax (650)-593-4020
> -----Original Message-----
> From: pymol-users-ad...@lists.sourceforge.net [mailto:pymol-users-
> ad...@lists.sourceforge.net] On Behalf Of Tsjerk Wassenaar
> Sent: Friday, June 27, 2003 1:48 AM
> To: pymol-users@lists.sourceforge.net
> Subject: [PyMOL] Bonds
>
>
> Hi all!
>
> I've written a script to position all atoms into a simulation box, but
> the connectivity stays, thus generating a beautiful image of bonds all
> across the box. Though not too clear. Is there a way to update the
> connectivity directly (other than saving the coordinates and
reloading)?
>
> Cheers,
>
> Tsjerk
>
> --
> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> -- :)
> -- :) Tsjerk A. Wassenaar, M.Sc.
> -- :) Molecular Dynamics Group
> -- :) Dept. of Biophysical Chemistry
> -- :) University of Groningen
> -- :) Nijenborgh 4
> -- :) 9747 AG Groningen
> -- :) The Netherlands
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