Nat,
That is what a ray-tracer hash-table bug looks like -- some of
those cylinders aren't being properly registered in 3D space and are
then missed. In order to fix this problem, it would sure help if you
could send me a session file or pdb + script that can reproduce the
problem.
Thanks,
Warren
--
mailto:[email protected]
Warren L. DeLano, Ph.D.
Principal Scientist
DeLano Scientific LLC
Voice (650)-346-1154
Fax (650)-593-4020
> -----Original Message-----
> From: [email protected] [mailto:pymol-users-
> [email protected]] On Behalf Of Nat Echols
> Sent: Wednesday, July 16, 2003 5:57 PM
> To: PyMOL list
> Subject: [PyMOL] weird artifact with cylindrical helices
>
>
> I'm trying to make some figures for a review, and I'm seeing weird
little
> partial spheres show up when I try to ray-trace a polymerase
structure:
>
> http://bioinfo.mbb.yale.edu/people/nat/weird.png
>
> They're in the bottom third of the picture, and seem to show up in
> the same location in the structure no matter what orientation. Any
idea
> what's causing these? I just gave up and used regular ribbons.
>
>
------------------------------------------------------------------------
--
> --
> Nathaniel Echols
> Programmer
> [email protected]
Gerstein
> Lab
> 203-589-6765 Yale
> University
>
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