RE: [PyMOL] Cartoon does not display properly

[Warren L. DeLano]

Dan,

        That’s what happens when there is no secondary structure
information defined.  PyMOL's “dss” command will solve this, but note
that dss will not give identical results to DSSP (the closest thing to a
standard for secondary structure assignment).

Cheers,
Warren
--
mailto:war...@delanoscientific.com
Warren L. DeLano, Ph.D.
Principal Scientist
DeLano Scientific LLC
Voice (650)-346-1154
Fax   (650)-593-4020 
-----Original Message-----
From: pymol-users-ad...@lists.sourceforge.net
[mailto:pymol-users-ad...@lists.sourceforge.net] On Behalf Of Daniel
Moriarty
Sent: Tuesday, January 20, 2004 10:41 AM
To: pymol-users@lists.sourceforge.net
Subject: [PyMOL] Cartoon does not display properly

Hello everyone,

I have a generated PDB file which gives very thick ribbons when I try to
do the cartoon display.  Apart from that, it seems fine.  I remember
seeing this problem once before with a file I downloaded from the PDB,
and I couldn’t resolve the problem then.  Any ideas on what to do?


Thanks,

Dan