Hubert,
You need to use the mdo command, e.g.
cmd.mclear()
cmd.mset("1 x10")
# Set all residues to white
cmd.mdo(1, "color white")
# Colour a residue
cmd.mdo(2, "color red, (i;51)")
# Clear colour of previous residue, and highlight a new one
cmd.mdo(3, "color white, (i;51); color red, (i;184)")
I tried to do this using the script language, but
mdo 2, color red, (i;51)
causes an error on my version (Linux 0.98beta05) - I think this is a bug.
Gareth
On Fri, 15 Oct 2004, Hubert Kettenberger wrote:
> Dear all!
>
> I would like to prepare a an animation in which I would like to follow
> one certain residue on its journey through an enzyme in a stepwise
> manner. To do so, I would like to color a certain residue, say, red in
> state one and grey in all other frames. In frame 2, the next residue
> should be red, all others grey. Frame three has the third residue red,
> all others grey etc.
>
> Is there a command like
>
> color red, residue 1 and state 1
> color red, residue 2 and state 2
> etc.,
>
> i.e. is there a way to apply colours selectively to a certain state?
>
> Thanks in advance for your ideas!
>
> Hubert
>
>
>
>
>
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-------------------------------------------------------------------------------
Gareth Stockwell
EMBL - European Bioinformatics Institute
Wellcome Trust Genome Campus
Hinxton
Cambridge CB10 1SD [email protected]
Tel 01223 492548 http://www.ebi.ac.uk/~gareth
