Hi Dirk, > a protein structure. Is there a way in PyMOL to export the individual frames for a movie from scenes? If not, this would be my most desired missing feature in PyMOL!
Yes. What I do is to use a script to step through each frame of the movie (rotation by 1 degree, zoom in slightly, change transparency slightly, etc), ray-trace (optional), and dump the png. From there, ffmpeg will combine all of these into a single movie file (memcoder is supposed to do this as well). I'm not entirely sure what you mean by frames from scenes, though. Hope this helps, Pete Pete Meyer Fu Lab BMCB grad student Cornell University