Simon,

Most likely you need to install vendor-specific OpenGL drivers to enable
hardware acceleration (Linux can't ship with them because they aren't
open-source).  Refer to the web site for your graphics card vendor.  

Without such drivers, PyMOL falls back on software OpenGL rendering,
which is much slower than RasMOL's more specialized molecule rendering
engine.  With a decent OpenGL graphics card and installed drivers,
PyMOL's performance should meet or exceed RasMOL.

Cheers,
Warren


--
Warren L. DeLano, Ph.D.                     
Principal Scientist

. DeLano Scientific LLC  
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> -----Original Message-----
> From: [email protected] 
> [mailto:[email protected]] On Behalf Of 
> Vsevolod (Simon) Ilyushchenko
> Sent: Monday, November 14, 2005 5:09 PM
> To: [email protected]
> Subject: [PyMOL] File size?
> 
> Hi,
> 
> I've installed pymol on a 3 Ghz 32-bit Linux box with 2.6 Gb 
> of RAM, and a user complained that pymol is very slow 
> compared to rasmol. Could you please give me an idea of the 
> upper limit on usable file size/complexity? Is it normal for 
> pymol to be slower than rasmol?
> 
> Thanks,
> Simon
> -- 
> 
> Simon (Vsevolod ILyushchenko)   [email protected]
>                               http://www.simonf.com
> 
> "Think like a man of action, act like a man of thought."
> 
>                        Henri Bergson
> 
> 
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