Indaneel, This isn't and won't be possible anytime soon, but you are welcome to hack the C code in order to dump that information out for the time being. Eventually we will have some nice alignment management facilities in PyMOL.
Cheers, Warren -- Warren L. DeLano, Ph.D. Principal Scientist . DeLano Scientific LLC . 400 Oyster Point Blvd., Suite 213 . South San Francisco, CA 94080 USA . Biz:(650)-872-0942 Tech:(650)-872-0834 . Fax:(650)-872-0273 Cell:(650)-346-1154 . mailto:war...@delsci.com > -----Original Message----- > From: pymol-users-ad...@lists.sourceforge.net > [mailto:pymol-users-ad...@lists.sourceforge.net] On Behalf Of > Indraneel Majumdar > Sent: Friday, January 06, 2006 12:27 PM > To: pymol-users@lists.sourceforge.net > Subject: [PyMOL] how to extract corresponding residue pairs > after alignment ? > > Hi, > > Is there any way to extract corresponding residue/atom pairs > after alignment? > eg. the atoms that are used to create the cgo when "object" > option is specified. (I guess this is probably in op1.ai1VLA > and op2.ai1VLA in layer3/Executive.c ?) > > Thanks in advance, > Indraneel > > -- > http://prodata.swmed.edu > > > ------------------------------------------------------- > This SF.net email is sponsored by: Splunk Inc. Do you grep > through log files > for problems? Stop! Download the new AJAX search engine that makes > searching your log files as easy as surfing the web. > DOWNLOAD SPLUNK! > http://ads.osdn.com/?ad_id=7637&alloc_id=16865&op=click > _______________________________________________ > PyMOL-users mailing list > PyMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users > > > >
