Hi!!!
I am trying to display an electrostatic potential surface
calculated by Delphi in Pymol.
I used the following instruction:
load delphi.phi
ramp_new map, delphi
load structure.pdb
set surface_color map, structure
show surface
I adopted this procedure in the past on some protein
systems and it worked well but now when I use it on other
proteins structure it gave me troubles. The problems is
that the surface is completely blue (positive) whereas
using other visualization programs it appears completely
different.
My Pymol version is 0.98, and I also tried a different
scale for the color surface but the results are always
the same.
Do you have some suggestions?
Thanks a lot in advance
Elena
