Hi Aaron, * Aaron New <[email protected]> [2006-02-09 09:36] wrote: > I have selected atoms near an object of interest, and extended this via > byres to a selection of the other atoms that are part of the same residue. > Is there any way to output a file that would have the coordinates of the > atoms I have selected and the residues they comprise? Any tips appreciated.
Let's say that your selection is called "near", then you could then type: save near.pdb, near or if you have not created an actual named selection, you could do it as: save near.pdb, byres object_name within <cutoff distance> of <object of interest selection here> If you just wanted to see a list of those residues, you could type: iterate near & name ca, print chain,resn,resi to get a list of those residues. Hope that helps. Cheers, Rob -- Robert L. Campbell, Ph.D. <[email protected]> Senior Research Associate phone: 613-533-6821 Dept. of Biochemistry, Queen's University, fax: 613-533-2497 Kingston, ON K7L 3N6 Canada http://adelie.biochem.queensu.ca/~rlc PGP Fingerprint: 9B49 3D3F A489 05DC B35C 8E33 F238 A8F5 F635 C0E2
