It looks like quite a few people are actually still using the electrostatics wizard, so I updated the code on my website (http://www.umich.edu/~mlerner/PyMOL). For what it's worth, I just use the visualization pane of the APBS plugin these days, but I understand if the wizard is a little cleaner for some purposes.
-- Biophysics Graduate Student Carlson Lab, University of Michigan http://www.umich.edu/~mlerner On 10/4/07, DeLano Scientific <del...@delsci.info> wrote: > > > Gianluigi, > > The API changed in PyMOL 1.0 in order to accomodate multiple PyMOL instances > in a single Python interpreter -- your wizard needs to be updated so that > the init method takes a "_self" keyword argument: > > def __init__(...., _self=cmd): > ... > > > -- > DeLano Scientific LLC > Subscriber Support Services > mailto:del...@delsci.info > > "Not yet a PyMOL Subscriber, but want to support the project? Email > sa...@delsci.com to quote your lab, school, or employer. Thank you for > sponsoring this open-source endeavor!" -WLD > > > > ________________________________ > From: pymol-users-boun...@lists.sourceforge.net > [mailto:pymol-users-boun...@lists.sourceforge.net] On > Behalf Of Gianluigi Caltabiano > Sent: Thursday, October 04, 2007 7:55 AM > To: pymol-users@lists.sourceforge.net > Subject: [PyMOL] APBS-electrostatics > > > > Hi everybody, > I am trying to use the "electrostatic" wizard to read some .dx file I made. > It always worked..since I up-graded to pymol 1.0. > Now it doesn't work ( I have already checked the "modification" in > __init__.py file, it's fine). > The message it give to me is: > > Traceback (most recent call last): > File "C:\Archivos de programa\DeLano > Scientific\PyMOL/modules\pymol\parser.py", line 251, in > parse > self.result=apply(layer.kw[0],layer.args,layer.kw_args) > File "C:\Archivos de programa\DeLano > Scientific\PyMOL/modules\pymol\wizarding.py", line 86, in > wizard > r = _wizard(name,arg,kwd,0) > File "C:\Archivos de programa\DeLano > Scientific\PyMOL/modules\pymol\wizarding.py", line 45, in > _wizard > wiz = apply(getattr(mod_obj,oname),arg,kwd) > TypeError: __init__() got an unexpected keyword argument '_self' > > Thank you for your help > > Gianluigi Caltabiano > > > ________________________________ > ________________________________ > L'email della prossima generazione? Puoi averla con la nuova Yahoo! Mail > > > ------------------------------------------------------------------------- > This SF.net email is sponsored by: Splunk Inc. > Still grepping through log files to find problems? Stop. > Now Search log events and configuration files using AJAX and a browser. > Download your FREE copy of Splunk now >> http://get.splunk.com/ > _______________________________________________ > PyMOL-users mailing list > PyMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users > >
