On Monday 21 January 2008 23:51:15 Toni Pizà wrote: > > I'm not sure this is what you're asking, but I use scripts by typing: > > > > @script.pml > > Thanks for your response, but I'm asking how to pass arguments to > pymol's scripts written in Python. I type "run nameOfScript.py" within > pymol for this, but I would pass some arguments, such as "run > script.py arg0 arg1".
The convential solution is to "run" a script that uses the "extend" command (see "help extend") to add a Python function as a new PyMOL command. This command can take any arguments you define for the function. Cheers, -- Lieven Buts Ultrastructure Laboratory Vrije Universiteit Brussel