> When i see the cartoon view, happens nothing, but if I use "show > surface" the transparency is shown. Do you know how to do it in the > cartoon view?
Toni, Set the "cartoon_transparency", not just "transparency". Here's the appropriate PyMOLWiki link: http://www.pymolwiki.org/index.php/Cartoon_transparency -- Jason -- Jason Vertrees (javer...@utmb.edu) Doctoral Candidate Biophysical, Structural & Computational Biology Program University of Texas Medical Branch Galveston, Texas http://www.best.utmb.edu/ http://www.pymolwiki.org/
