Hi Carsten,
The best way to share PyMOL content with novice users is via pre-defined
scenes stored in a session file. Users can then simply open the session
file and use Page Down to iterate through the scenes. Each scene can be
annotated with text, for example:
scene 001, store, The target structure (press the Page Down key).
...
scene 002, store, Surface of the binding site.
...
scene 003, store, Our lead compound ABC-12346.
...
NOTE: For multi-line annotations, you need to use the Python form of the
command:
cmd.scene("003","store","My first line of text\nMy second line of text")
Cheers,
Warren
--
DeLano Scientific LLC
Subscriber Support Services
mailto:[email protected]
> -----Original Message-----
> From: [email protected]
> [mailto:[email protected]] On Behalf
> Of Schubert, Carsten [PRDUS]
> Sent: Friday, April 25, 2008 6:38 AM
> To: [email protected]
> Subject: [PyMOL] Embeding commands in PyMol session?
>
> Hi,
>
> is it possible to embed commands or scripts into a pymol
> session? I am routinely creating PyMol sessions for users who
> for the most part have no clue how to use PyMol. So I'd like
> to include a dialog or message, which gets displayed after
> the session has loaded and clues the user in how to start or
> at least what he is looking at.
>
> Cheers,
>
> Carsten
>
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