I'm not sure it's exactly what you're looking for, but this seems similar:

http://hollow.sourceforge.net/

On Tue, May 27, 2008 at 4:53 PM, Thomas S. Leyh, Ph. D. <l...@aecom.yu.edu>
wrote:

>       From time to time I find it valuable to view the suface of a
> ligand-binding pocket looking out from the surface's interior.   This is
> accomplished in a variety of ways - principally, zooming and clipping.  It
> would be wonderful to be able to represent just the "skin" of the active
> site wrapping around the ligands, like a sac - this seems quite difficult to
> achieve.  A related problem is that ray-ing a surface that has been clipped
> yields a collection of odd surface regions that represent poorly the
> non-ray-ed version - it is as if the resolution of the ray it too gross to
> capture the clipping edges.
>
>    Advice appreciated.
>
>     Thanks,
>
>     Tom Leyh
>
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-- 
Michael Lerner, Ph.D.
IRTA Postdoctoral Fellow
Laboratory of Computational Biology NIH/NHLBI
5635 Fishers Lane, Room T909
http://www.umich.edu/~mlerner

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