Hi Ben, Current versions of MacPyMOL make use of the 2.3 version of the operating-system-provided Python interpreter. Future versions may behave differently.
Officially speaking, if you need to integrate external native-code-containing Python modules, then DeLano Scientific's sole recommended approach is to compile the Open-Source PyMOL source code for X11 instead of using MacPyMOL/PyMOLX11Hybrid. Unfortunately, the Python C ABI is just too fragile for anything else to be practical... Cheers, Warren -- DeLano Scientific LLC Subscriber Support Services mailto:supp...@delsci.com > -----Original Message----- > From: Ben Eisenbraun [mailto:b...@crystal.harvard.edu] > Sent: Wednesday, December 17, 2008 9:53 AM > To: pymol-users@lists.sourceforge.net > Subject: [PyMOL] adding python modules for MacPyMOL > > > Is it possible to add additional python modules to a MacPyMOL > installation? > > I am trying to install the PyNMR plugin: > > http://maple.rsvs.ulaval.ca/mediawiki/index.php/PyNMR > > And it requires the Numeric python module. I have an > external python installation built with the module, but it > seems that MacPyMOL uses a bundled python interpreter. > > I tried setting the PYTHONPATH to the modules directory of my > python build, but I get errors like this: > > /programs/i386-mac/python/2.5.2/lib/python2.5/site-packages/Nu meric/Numeric.py:91: RuntimeWarning: Python C API version > mismatch for module multiarray: This Python has API version > 1012, module multiarray has version 1013. > > I poked around in the PyMOLX11Hybrid.app directories, but > didn't see an obvious place I could add a module installation. > > Thanks. > > -ben > > -- > Ben Eisenbraun > Structural Biology Grid Harvard > Medical School > http://sbgrid.org > http://hms.harvard.edu > > -------------------------------------------------------------- > ---------------- > SF.Net email is Sponsored by MIX09, March 18-20, 2009 in Las > Vegas, Nevada. > The future of the web can't happen without you. Join us at > MIX09 to help pave the way to the Next Web now. Learn more > and register at > http://ad.doubleclick.net/clk;208669438;13503038;i?http://2009 .visitmix.com/ > _______________________________________________ > PyMOL-users mailing list > PyMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users
