Has anyone got the Caver 2.0.003 plugin working in Ubuntu 9.04? I can
install the plugin in pymol, load the example pdb (1MJ5) and open the
dialog box, which seems to have the correct paths to the plugin .jar and
lib directory. I can even select the correct starting point and have it
displayed in pymol. However, when I click on compute tunnel, I get the
error dialog box with:
Error: 1
<type 'exceptions.RuntimeError'> Exception in Tk callback
Function: <function <lambda> at 0xb024c6c> (type: <type 'function'>)
Args: ()
Traceback (innermost last):
File
"/home/rrowlett/pymol/ext/lib/python2.5/site-packages/Pmw/Pmw_1_3/lib/PmwBase.py",
line 1747, in __call__
return apply(self.func, args)
File
"/home/rrowlett/pymol/ext/lib/python2.5/site-packages/Pmw/Pmw_1_3/lib/PmwDialog.py",
line 153, in <lambda>
command=lambda self=self, name=name: self._doCommand(name))
File
"/home/rrowlett/pymol/ext/lib/python2.5/site-packages/Pmw/Pmw_1_3/lib/PmwDialog.py",
line 132, in _doCommand
return command(name)
File "/home/rrowlett/pymol/modules/pmg_tk/startup/Caver2_0_003.py",
line 429, in execute
self.CreateDirectory(outdir)
File "/home/rrowlett/pymol/modules/pmg_tk/startup/Caver2_0_003.py",
line 504, in CreateDirectory
.
.
.
etc.
Same result in pymol 1.2r0 or 1.2b5
The Windows version works OK, but it would be nice to have my Linux
workstations work, too.
--
------------------------------------------------------------------------
Roger S. Rowlett
Professor
Colgate University Presidential Scholar
Department of Chemistry
Colgate University
13 Oak Drive
Hamilton, NY 13346
tel: (315)-228-7245
ofc: (315)-228-7395
fax: (315)-228-7935
email: [email protected]
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