Hi! You can also try bni-tools.
http://sourceforge.net/projects/bni-tools/ It's a pymol plugin containing various little scripts i needed for myself which i summed up there. Unfortunately i had no time to write a manual, and i don't know if it works with every pymol version. (and it is not entirely bug-proofed) Most of the commands work on the selection "(sele)" for simplicity. Just give it a try and experiment with it. Install the plugin and you will find it at Plugin-->BNI Pymol Plugin v. XX Select the amino acids you want to convert into sequence and click on "get sequences" and select the format. It also should work on multiple selections and should split the output into objects and chains. Copy the sequences from the output window and paste it wherever you want. Cheers, Georg Georg Steinkellner Research Centre Applied Biocatalysis Enzyme Development and Analytics c/o Karl-Franzens University of Graz (ZMB) Centre of Molecular Biosciences ------------------------------------------------------------------------------ Come build with us! The BlackBerry® Developer Conference in SF, CA is the only developer event you need to attend this year. Jumpstart your developing skills, take BlackBerry mobile applications to market and stay ahead of the curve. Join us from November 9-12, 2009. Register now! http://p.sf.net/sfu/devconf _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
