>2. Is there any way to get  the information about bonds, angles and dihedrals ?
>   I found the following command can display the bonds information, but can't 
> be assigned to a variable.
>>      >cmd.select('all')
>      >atoms=cmd.get_model('sele')
>      >print atoms.list()
http://pymolwiki.org/index.php/Get_Distance 
http://pymolwiki.org/index.php/Get_Angle
http://pymolwiki.org/index.php/Get_Dihedral

>3. Is there any way to learn these python api commands of pymol ?
http://pymolwiki.org/index.php/Category:Commands is a good start, looking 
through the script library is good.  using other python techniques to dump the 
contents of cmd is good.

>
>Thank you!
>
> 
>Blog: http://blog.4message.net
>



      

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