Dear Kousik, Sue Jones PROTORP server should do the trick:
http://bioinformatics.sussex.ac.uk/protorp Cheers, Thomas On Wed, Dec 9, 2009 at 14:57, Kousik Kundu <kou...@informatik.uni-freiburg.de> wrote: > > Dear Sir, > I, Kousik Kundu, am a Ph.D student at university of Freiburg, > Germany. I am using Pymol for my recent work. I need to to the > amino acids involve in an interaction. For example 1BM2 (PDB id) > is a complex of a SH2 domain and a small peptide. Here i want to > know which amino acids (in both SH2 domain and peptide) are > involved in the interaction. > > e.g. position 97 (SH2) interacting with position 11,14 (peptides) > > I need it little urgently. If you help me, I would be really grateful to you. > > Thank you in advanced .. > > Best Regards, > > Kousik Kundu > ********************************** > > Kousik Kundu > Bioinformatics Group > Institute of Computer Science > Albert-Ludwigs-University Freiburg > Georges-Köhler-Allee 106 > 79110 Freiburg > Germany > Tel: +49 761 203 7465 > Fax: +49 761 203 7464 > > > ------------------------------------------------------------------------------ > Return on Information: > Google Enterprise Search pays you back > Get the facts. > http://p.sf.net/sfu/google-dev2dev > _______________________________________________ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net > ------------------------------------------------------------------------------ Return on Information: Google Enterprise Search pays you back Get the facts. http://p.sf.net/sfu/google-dev2dev _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
