Hi Jay, Do you mean you want to draw a sphere at some specific point? Or is there more to it? A sphere could be drawn in two ways. You could use CGOs for that:
from pymol.cgo import * cmd.load_cgo([SPHERE,x,y,z,r,R,G,B],"sphere"]) substituting x, y, and z for the coordinates of the center, r for the radius, and R, G, and B for the color. Alternatively you can use 'pseudoatom', which gives more flexibility in changing color and radius dynamically: pseudoatom sphere, pos=(x,y,z), color=wheat, vdw=r Hope it helps, Tsjerk 2010/9/9 SongJianHui <[email protected]>: > Hi all, > > I am using pymol to monitor the structure evolution of one protein which > could be bound to some fixed points on a spherical surface. However, I have > no idea about how to incorporate these active points in pymol. Any > suggestion is welcome. Thanks in advance. > > Cheers, > Jay > > ------------------------------------------------------------------------------ > This SF.net Dev2Dev email is sponsored by: > > Show off your parallel programming skills. > Enter the Intel(R) Threading Challenge 2010. > http://p.sf.net/sfu/intel-thread-sfd > _______________________________________________ > PyMOL-users mailing list ([email protected]) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/[email protected] > -- Tsjerk A. Wassenaar, Ph.D. post-doctoral researcher Molecular Dynamics Group Groningen Institute for Biomolecular Research and Biotechnology / University of Groningen The Netherlands ------------------------------------------------------------------------------ Start uncovering the many advantages of virtual appliances and start using them to simplify application deployment and accelerate your shift to cloud computing http://p.sf.net/sfu/novell-sfdev2dev _______________________________________________ PyMOL-users mailing list ([email protected]) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/[email protected]
