Why do you expect PISA to agree with author assigned biological units? Read the paper and see if there's a reason the authors made the assignment.
If you really don't understand why things might be different, read the intro to the ProtCID paper. -David On Mar 3, 2011, at 6:37 AM, kanika sharma <ksharma...@gmail.com> wrote: > protein 1b8e says its a dimer by its pdb file info as: > > BIOMOLECULE: 1 > REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC > > REMARK 350 APPLY THE FOLLOWING TO CHAINS: A > > REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 > > REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 > > REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 > > REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 > > REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 > > REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 33.43000 > > when i feed the same into pisa..it says no assemblies are possible... > i can't make out...can ny1 help..???? > > Regards, > Kanika > ------------------------------------------------------------------------------ > Free Software Download: Index, Search & Analyze Logs and other IT data in > Real-Time with Splunk. Collect, index and harness all the fast moving IT data > generated by your applications, servers and devices whether physical, virtual > or in the cloud. Deliver compliance at lower cost and gain new business > insights. http://p.sf.net/sfu/splunk-dev2dev > _______________________________________________ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
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