Hi Matthias, Yes, ray tracing transparent cartoons should be as simple as:
set cartoon_transparency, 0.5, objName For example: # fetch a few proteins fetch 1rx1 1rx2, async=0 # color them separately color cyan, 1rx1 color firebrick, 1rx2 # set the transparency on 1rx1 set cartoon_transparency, 0.5, 1rx1 # the blue cartoon should be transparent # in the ray traced image as cartoon zoom i. 43 ray Cheers, -- Jason On Mon, Jul 11, 2011 at 11:06 AM, Matthias Schmidt <matthias.rene.schm...@gmail.com> wrote: > Hi, > > Apologies if that has come up before, but is it possible to ray-trace > transparent cartoons? PyMol 1.4 (port on MacOs) does not seem to do > that. The OpenGL cartoon however is transparent and looks fine. > > Best, > > Matthias > -- > Structural Bioinformatics and Computational Biochemistry Unit > Dept. of Biochemistry > University of Oxford > http://sbcb.bioch.ox.ac.uk/schmidt.php > > ------------------------------------------------------------------------------ > All of the data generated in your IT infrastructure is seriously valuable. > Why? It contains a definitive record of application performance, security > threats, fraudulent activity, and more. Splunk takes this data and makes > sense of it. IT sense. And common sense. > http://p.sf.net/sfu/splunk-d2d-c2 > _______________________________________________ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net > -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) jason.vertr...@schrodinger.com (o) +1 (603) 374-7120 ------------------------------------------------------------------------------ All of the data generated in your IT infrastructure is seriously valuable. Why? It contains a definitive record of application performance, security threats, fraudulent activity, and more. Splunk takes this data and makes sense of it. IT sense. And common sense. http://p.sf.net/sfu/splunk-d2d-c2 _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
