thanks! that is true, I may do this in Phenix... Those maps will be small
and quickly loadable.
I found out that I missed the Youtube video about the Volume in Pymol 1.4,
which is listed on Pymol wiki page, I am sorry. It seems that it might be
not available in the 1.3 version.
Thank you!
On Tue, Sep 6, 2011 at 11:10 AM, Pete Meyer <pame...@mcw.edu> wrote:
> I don't know if there's a way to do this from within pymol, but it's fairly
> straightforward to do using mapman (from ccp4) - or your favorite map
> utility.
>
> Pete
>
>
> Tatyana Sysoeva wrote:
>
>> Dear Pymol experts!
>>
>> I am going to make a presentation with running Pymol during it. I would
>> like to show small details (ligand densities) of several ED maps in this
>> presentation.
>> I will have to keep several Pymol instances running due to setup of the
>> presentation to avoid loading big files on the fly.
>> I am worrying that if I open and carve all maps within one of the Pymol
>> instances it will be very resource consuming. That is why I am wondering if
>> there is a way to save the carved ED around the ligands as a volume object
>> and use this for the life presentation instead of the maps? I found a short
>> article named "volume" and mentioning of the "map_new" but I could not fine
>> a fuller description of these commands.
>>
>> The main problem is that I am using stereo projection and do not want to
>> render pictures and movies, therefore all view will show up in 3D.
>>
>> I am using Win7 system with the Pymol v1.3. If there is any additional
>> information or details are needed - I am more than happy to provide them!
>>
>> Thank you very much in advance!
>>
>> Cheers,
>> Tanya
>>
>>
>
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