Dear all,
I used the following script David pointed out:
from pymol.cgo import *
from pymol import cmd
w = 0.06 # cylinder width
l = 0.75 # cylinder length
h = 0.25 # cone hight
d = w * 1.618 # cone base diameter
obj = [CYLINDER, 0.0, 0.0, 0.0, l, 0.0, 0.0, w, 1.0, 0.0, 0.0, 1.0, 0.0, 0.0,
CYLINDER, 0.0, 0.0, 0.0, 0.0, l, 0.0, w, 0.0, 1.0, 0.0, 0.0, 1.0, 0.0,
CYLINDER, 0.0, 0.0, 0.0, 0.0, 0.0, l, w, 0.0, 0.0, 1.0, 0.0, 0.0, 1.0,
CONE, l, 0.0, 0.0, h+l, 0.0, 0.0, d, 0.0, 1.0, 0.0, 0.0, 1.0, 0.0,
0.0, 1.0, 1.0,
CONE, 0.0, l, 0.0, 0.0, h+l, 0.0, d, 0.0, 0.0, 1.0, 0.0, 0.0, 1.0,
0.0, 1.0, 1.0,
CONE, 0.0, 0.0, l, 0.0, 0.0, h+l, d, 0.0, 0.0, 0.0, 1.0, 0.0, 0.0,
1.0, 1.0, 1.0]
cmd.load_cgo(obj, 'axes')
The axes appear, but the screen in pymol is now split into two sections with
the cross covering one part. Is there a chance to move the cross closer to the
model in one screen section?
A bit like shown in picture on page http://pymolwiki.org/index.php/Axes .
Kind regards
Gudrun
Am 27.02.2012 um 12:01 schrieb David Hall:
> http://pymolwiki.org/index.php/Axes
>
> -David
>
> On Feb 27, 2012, at 5:38 AM, Gudrun Lotze <gudrun.lo...@gmx.net> wrote:
>
>> Dear all,
>>
>> is it possible to show in Pymol a little coordinate cross with axes x,y,z,
>> for example like in VMD, please?
>> I have a protein made from dummy atoms and there is no unit cell.
>> I just want to show clearly which plane is shown when presenting the model
>> in my document.
>>
>> Thank you for your help.
>> Kind regards
>> Gudrun Lotze
>>
>>
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