Hi Vaibhav, First: I assume you did NOT copy the "PocketPickerScript" to "C:\Program Files\DeLano Scientific\PyMOL\modules\pmg_tk\startup", otherwise there would not be a "No such file" error.
Second: The plugin does not use the best coding style, it has hard coded file paths. So I would not be surprised if you will encounter more errors when using it. However, the plugin works for me on my Linux box after some modifications. Also, there is no "version" command in PyMOL, but a "get_version" command. Hope that helps. Cheers, Thomas On 04/03/2012 05:50 AM, vaibhav dixit wrote: > Dear Pymol users, > I am using pymol for modeling purposes. I wanted to display active site > shape in my report. > So I cam across your programm pocketpicker. > > I followed the procedure given on page > http://gecco.org.chemie.uni-frankfurt.de/pocketpicker/PocketPicker_Readme.pdf > > But unfortunately the plugin is not getting installed. I am using > windows vista OS. > Please suggest on how to install it correctly? > Thank you. > > Following is the message displayed. > > ---- > PyMOL>version > Traceback (most recent call last): > File "C:\Program Files\DeLano > Scientific\PyMOL/modules\pymol\parser.py", line 455, in parse > exec(layer.com2+"\n",self.pymol_names,self.pymol_names) > File "<string>", line 1, in ? > NameError: name 'version' is not defined > PyMOL>run C:\Program Files\DeLano > Scientific\Pymol\modules\pmg_tk\startup\PocketPickerScript\LigandKicker_1.0.py > <http://ligandkicker_1.0.py/> > Traceback (most recent call last): > File "C:\Program Files\DeLano > Scientific\PyMOL/modules\pymol\parser.py", line 332, in parse > > parsing.run_file(exp_path(layer.args[0]),self.pymol_names,self.pymol_names) > File "C:\Program Files\DeLano > Scientific\PyMOL/modules\pymol\parsing.py", line 455, in run_file > execfile(file,global_ns,local_ns) > IOError: [Errno 2] No such file or directory: 'C:\\Program Files\\DeLano > Scientific\\Pymol\\modules\\pmg_tk\\startup\\PocketPickerScript\\LigandKicker_1.0.py > <http://ligandkicker_1.0.py/>' > ---- > > -- > With regards > > Vaibhav A. Dixit > Ph.D. Scholar > Department of Medicinal Chemistry > Natl. Inst. Pharm. Edu. & Res. (NIPER) > Sector 67, Phase X, S.A.S. Nagar (Mohali) > Punjab -160 062 INDIA > Phone (Mobile): +919915214408 > E-mail: vaibhavadi...@gmail.com <mailto:vaibhavadi...@gmail.com> > www.niper.nic.in <http://www.niper.nic.in> -- Thomas Holder MPI for Developmental Biology Spemannstr. 35 D-72076 Tübingen ------------------------------------------------------------------------------ Better than sec? Nothing is better than sec when it comes to monitoring Big Data applications. Try Boundary one-second resolution app monitoring today. Free. http://p.sf.net/sfu/Boundary-dev2dev _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
