Hi pymol-users
I have previously been able to make quite nice visualizations of my volume
object, containing the time-averaged density of atoms from a MD-simulation.
For making even more improvement, I'd like to be able to use a script (either
python or pml) to control which regions of density gets which color.
I've found this thread
http://www.mail-archive.com/pymol-users@lists.sourceforge.net/msg10294.html
that suggests it to be possible, but understanding how to use that for my case
is unfortunately (yet) a bit beyond my current pymol-skills.
Ideally I would want to have a solution that allows me to load in my
volume-file (in .dx format), assign colors to different regions of density
systematically (the Volume-GUI is great, but somewhat tricky to make quick
changes with), and display the result on screen.
Is such a thing possible?
Thanks
/Per
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