Morphing toward a target .pdb, or end-point analysis and 1) solvent box; or 2) vacuum?
g...@ohsu.edu On Nov 26, 2012, at 12:42 PM, "Hasan Demirci" <demirch...@gmail.com> wrote: > Dear all, > I am trying to morph two protein-protein complex pdb files. > Everything looks fine but somehow during the morphing the complex structure > is also bouncing up and down instead of a morphing at a fix large catalytic > reference domain of chain A. > If I only use chain A of the complex it morphs perfectly, somehow including > chain B makes things complicated. > How can I morph these two pdb without extra bouncing. > > With my best regards. > > Hasan > ------------------------------------------------------------------------------ > Monitor your physical, virtual and cloud infrastructure from a single > web console. Get in-depth insight into apps, servers, databases, vmware, > SAP, cloud infrastructure, etc. Download 30-day Free Trial. > Pricing starts from $795 for 25 servers or applications! > http://p.sf.net/sfu/zoho_dev2dev_nov > _______________________________________________ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net ------------------------------------------------------------------------------ Monitor your physical, virtual and cloud infrastructure from a single web console. Get in-depth insight into apps, servers, databases, vmware, SAP, cloud infrastructure, etc. Download 30-day Free Trial. Pricing starts from $795 for 25 servers or applications! http://p.sf.net/sfu/zoho_dev2dev_nov _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
