Hi, I have been trying to use the script draw_links.py at http://pldserver1.biochem.queensu.ca/~rlc/work/pymol/ to view links between each pair of c-alpha atoms present in an atom selection. Once I load a PDB (1q16.pdb) and make an atom selection, lets say : PyMOL>select pk1, name CA in resi 5+10+15+12+16 and chain C , on the command-line in pymol, I do : PyMOL>run draw_links.py
I wanted to visualise links between all pairs of calpha atoms present in the atom selection, pk1. However I am unable to do that using draw_links.py I am doing: PyMOL> draw_links pk1 How can I do this using draw_links.py? Where am I going wrong? - Anasuya Dighe -- This message has been scanned for viruses and dangerous content by MailScanner, and is believed to be clean. ------------------------------------------------------------------------------ Everyone hates slow websites. So do we. Make your web apps faster with AppDynamics Download AppDynamics Lite for free today: http://p.sf.net/sfu/appdyn_d2d_feb _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
