If none suggests a solution in PyMOL ten use sscache.tcl script in VMD to
update the SS at every frame.

Thomas

On 24 April 2013 17:31, Jianghai Zhu <j...@idi.harvard.edu> wrote:

> Hi,
>
> I have a trajectory file, in which two short helices would merge into one
> long helix.  However, when I play the trajectory in Pymol as cartoon, the
> long helix would still be shown as two helices with a loop in between.  Is
> there a way to force Pymol to show a long helix for a specific range of
> frames in a trajectory? Thanks a lot.
>
> --Jianghai
>
>
>
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-- 

======================================================================

Thomas Evangelidis

PhD student
University of Athens
Faculty of Pharmacy
Department of Pharmaceutical Chemistry
Panepistimioupoli-Zografou
157 71 Athens
GREECE

email: tev...@pharm.uoa.gr

          teva...@gmail.com


website: https://sites.google.com/site/thomasevangelidishomepage/
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