I would be interested in just how the problem has been solved!
I just installed caver v-2.1.2 in the 64 bit Debian Testing with PyMOL
v-1.6.0.0 compiled from the latest svn and functioning perfectly on my
system.
Carver installed from the PyMOL wicki via the PyMOL Plugin Manager
without any complaints. Yet when I try to use the plugin I get:
ERROR: Directory incorrectly specified -plugin.jar not found, check
directory/where/jar/with/plugin/is/locate/Carver2_1.jar
Both Carver2_1_2.py and Carver2_1_2.pyc are in the startup
subdirectory. Also other plugins are working without complaint.
This is exactly the way the plug was working the last time that I
attempted its installation and use.
On 11/15/2013 03:14 PM, James Starlight wrote:
This issue have been solved. Caver works fine. Does anyone tried to
include path information obtained by caver to the NAMD steered md
simulation? I'm looking for the protocol for guiding namd forces along
the direction obtaned from CAVER.
James
2013/11/15 James Starlight <jmsstarli...@gmail.com
<mailto:jmsstarli...@gmail.com>>
Dear Pymol Users!
In the latest 3.0 releases of the CAVER plugin lack the source
path for the caver.jar launch file. Could you tell me how I could
define this path manually from pymol shell? I've try to make
calculations with thus plugin having Caver 3.0 dir in the work
folder but obtained error that /where/caver3 not found
Thanks for help
James
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