Hi Anasuya,
And for the other part of your question, check out ray_trace_color:
set ray_trace_color, hotpink
The thickness can be controlled with ray_trace_gain:
set ray_trace_gain, 2
Hope it helps,
Tsjerk
On Tue, Nov 19, 2013 at 5:21 PM, Jason Vertrees <
jason.vertr...@schrodinger.com> wrote:
> Anasuya,
>
> set ray_trace_mode, 1
>
> Cheers,
>
> -- Jason
>
> On Tue, Nov 19, 2013 at 12:24 AM, Anasuya Dighe
> <anas...@mbu.iisc.ernet.in> wrote:
> >
> > Dear users,
> > I was interested in knowing if there is an option or setting in PyMOL
> which is
> > able to make an outline to spheres.
> > I am aware of the show spheres command and have used it extensively to
> show
> > C-alpha atoms of amino acids as spheres.
> > I am curious to know how I could make an outline to the C-alpha atoms
> in a
> > particular selection. Also, once the outline is made, how might I be
> able to
> > change the color of such an outline ?
> >
> > Please let me know.
> >
> > Thanks,
> >
> > Anasuya
> >
> >
> > --
> > This message has been scanned for viruses and
> > dangerous content by MailScanner, and is
> > believed to be clean.
> >
> >
> >
> ------------------------------------------------------------------------------
> > Shape the Mobile Experience: Free Subscription
> > Software experts and developers: Be at the forefront of tech innovation.
> > Intel(R) Software Adrenaline delivers strategic insight and game-changing
> > conversations that shape the rapidly evolving mobile landscape. Sign up
> now.
> >
> http://pubads.g.doubleclick.net/gampad/clk?id=63431311&iu=/4140/ostg.clktrk
> > _______________________________________________
> > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
> > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
> > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
>
>
>
> --
> Jason Vertrees, PhD
> Director of Core Modeling Products
> Schrödinger, Inc.
>
> (e) jason.vertr...@schrodinger.com
> (o) +1 (603) 374-7120
>
>
> ------------------------------------------------------------------------------
> Shape the Mobile Experience: Free Subscription
> Software experts and developers: Be at the forefront of tech innovation.
> Intel(R) Software Adrenaline delivers strategic insight and game-changing
> conversations that shape the rapidly evolving mobile landscape. Sign up
> now.
> http://pubads.g.doubleclick.net/gampad/clk?id=63431311&iu=/4140/ostg.clktrk
> _______________________________________________
> PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
> Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
>
--
Tsjerk A. Wassenaar, Ph.D.
------------------------------------------------------------------------------
Shape the Mobile Experience: Free Subscription
Software experts and developers: Be at the forefront of tech innovation.
Intel(R) Software Adrenaline delivers strategic insight and game-changing
conversations that shape the rapidly evolving mobile landscape. Sign up now.
http://pubads.g.doubleclick.net/gampad/clk?id=63431311&iu=/4140/ostg.clktrk
_______________________________________________
PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
