I have just downloaded pymol 1.7 along with python 2.7.6. (I previously had
pymol 1.3). I am able to open existing .pdb and .pse files I have saved, but if
I try to fetch them from the PBD I get a huge error message (see below). I feel
like this question has been asked before but cannot find it on the forum. Thank
you in advance! Suzanne
PyMOL>fetch 4bd2
please wait ...
Exception in thread Thread-4:
Traceback (most recent call last):
File "C:\Python27\lib\threading.py", line 810, in __bootstrap_inner
self.run()
File "C:\Python27\lib\threading.py", line 763, in run
self.__target(*self.__args, **self.__kwargs)
File "C:\Python27\lib\site-packages\pymol\commanding.py", line 561, in wrapper
func(*args, **kwargs)
File "C:\Python27\lib\site-packages\pymol\importing.py", line 1348, in
_multifetch
discrete, multiplex, zoom, type, path, file, quiet, _self)
File "C:\Python27\lib\site-packages\pymol\importing.py", line 1292, in _fetch
contents = internal.file_read(url)
File "C:\Python27\lib\site-packages\pymol\internal.py", line 308, in file_read
handle = urllib.urlopen(finfo)
File "C:\Python27\lib\urllib2.py", line 127, in urlopen
return _opener.open(url, data, timeout)
File "C:\Python27\lib\urllib2.py", line 404, in open
response = self._open(req, data)
File "C:\Python27\lib\urllib2.py", line 422, in _open
'_open', req)
File "C:\Python27\lib\urllib2.py", line 382, in _call_chain
result = func(*args)
File "C:\Python27\lib\urllib2.py", line 1403, in ftp_open
mtype = mimetypes.guess_type(req.get_full_url())[0]
File "C:\Python27\lib\mimetypes.py", line 297, in guess_type
init()
File "C:\Python27\lib\mimetypes.py", line 358, in init
db.read_windows_registry()
File "C:\Python27\lib\mimetypes.py", line 258, in read_windows_registry
for subkeyname in enum_types(hkcr):
File "C:\Python27\lib\mimetypes.py", line 249, in enum_types
ctype = ctype.encode(default_encoding) # omit in 3.x!
UnicodeDecodeError: 'ascii' codec can't decode byte 0xd7 in position 2: ordinal
not in range(128)
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