Yes, this is possible, but it depends on your pymol version. Here http://www.pymolwiki.org/index.php/Load_Traj is a description how to do this. At first you must load a topology file, and after this you trajectory file, and both files need to have the same name (eg: "com.top" and "com.cdc").
And the amount of frames it can handle depends on your computer. Keep in mind, that if you change something that it will take some time, that it will take place. Pymol is here a lot slower than vmd. Am Montag, den 06 Okt 2014 schrieb sunyeping: > Dear all, Can pymol make a movie from the trajectory file of molecular > dynamics ( dcd file from NAMD simulation or trr file from GROMACS MD > simulation) that contains several thousands of frames? and how?Best regards. > Yeping Sun > Institute of Microbiology, Chinese Academy of Sciences > ------------------------------------------------------------------------------ > Meet PCI DSS 3.0 Compliance Requirements with EventLog Analyzer > Achieve PCI DSS 3.0 Compliant Status with Out-of-the-box PCI DSS Reports > Are you Audit-Ready for PCI DSS 3.0 Compliance? Download White paper > Comply to PCI DSS 3.0 Requirement 10 and 11.5 with EventLog Analyzer > http://pubads.g.doubleclick.net/gampad/clk?id=154622311&iu=/4140/ostg.clktrk > _______________________________________________ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- German Erlenkamp Computational Pharmaceutical Chemistry and Molecular Bioinformatics Heinrich-Heine-Universität Düsseldorf Institut für Pharmazeutische und Medizinische Chemie Universitätsstr. 1 40225 Düsseldorf Germany Tel: +49-211-81-13829 E-Mail: erlenk...@uni-duesseldorf.de URL: http://cpclab.uni-duesseldorf.de ------------------------------------------------------------------------------ Meet PCI DSS 3.0 Compliance Requirements with EventLog Analyzer Achieve PCI DSS 3.0 Compliant Status with Out-of-the-box PCI DSS Reports Are you Audit-Ready for PCI DSS 3.0 Compliance? Download White paper Comply to PCI DSS 3.0 Requirement 10 and 11.5 with EventLog Analyzer http://pubads.g.doubleclick.net/gampad/clk?id=154622311&iu=/4140/ostg.clktrk _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
